RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TAS2R42Q7RTR8 314 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 PCYOX1LQ8NBM8 494 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 RAET1EQ8TD07 263 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 SLC2A14Q8TDB8 520 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 EFCAB1Q9HAE3 211 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 OLA1Q9NTK5 396 aaKnown RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 PKD2L2Q9NZM6 624 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 RUVBL2Q9Y230 463 aaKnown RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 TYW5A2RUC4 315 aaKnown RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 SRRM3A6NNA2 597 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 GPR182O15218 404 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 HCRTO43612 131 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 SMNDC1O75940 238 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 THP07101 528 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 ASGR1P07306 291 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 THRAP10827 490 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 INPP1P49441 399 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 BCAT1P54687 386 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 CDK16Q00536 496 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 ZNF252P-AS1Q0IIN9 211 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 TRIM32Q13049 653 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 INPP5AQ14642 412 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 OASLQ15646 514 aaKnown RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 SOWAHAQ2M3V2 549 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 GDF6Q6KF10 455 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 TTC33Q6PID6 262 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 ATPAF2Q8N5M1 289 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 APOPT1Q96IL0 206 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 GCNAQ96QF7 691 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 ZNF184Q99676 751 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 KLHL4Q9C0H6 718 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 EML4Q9HC35 981 aaKnown RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 IARS2Q9NSE4 1012 aaKnown RBP10.21□□□□□ -0.77
TRAF1-202ENST00000540010 GRHL1Q9NZI5 618 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 DCDC2Q9UHG0 476 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 GTF2IRD1Q9UHL9 959 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 AP4E1Q9UPM8 1137 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 DOCK3Q8IZD9 2030 aa10.21□□□□□ -0.77
TRAF1-202ENST00000540010 SNUPNO95149 360 aaKnown RBP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 STAU1O95793 577 aaKnown RBP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 JCHAINP01591 159 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 XPAP23025 273 aaPredicted RBP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 TSPY1Q01534 308 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 SP3Q02447 781 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 BST2Q10589 180 aaKnown RBP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 PMF1Q6P1K2 205 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 NPNTQ6UXI9 565 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 TRPV1Q8NER1 839 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 SEC14L1Q92503 715 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 FAM105AQ9NUU6 356 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 STARD13Q9Y3M8 1113 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 hCG_1818297A0A087WSY0 165 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 PSMG1O95456 288 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 HOXD10P28358 340 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 PTPN7P35236 360 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 DPYSL3Q14195 570 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 ZNF235Q14590 738 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 KCNA10Q16322 511 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 FUT11Q495W5 492 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 SPDYCQ5MJ68 293 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 SEL1L3Q68CR1 1132 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 ZDHHC24Q6UX98 284 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 BNC2Q6ZN30 1099 aaPredicted RBP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 THEM5Q8N1Q8 247 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 COLGALT1Q8NBJ5 622 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 CEP19Q96LK0 163 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 ZDHHC18Q9NUE0 388 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 NDFIP2Q9NV92 336 aa10.21□□□□□ -0.78
TRAF1-202ENST00000540010 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 TIMM13Q9Y5L4 95 aaPredicted RBP10.21□□□□□ -0.78
TRAF1-202ENST00000540010 GRIN2DO15399 1336 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 CASTOR2A6NHX0 329 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PEX1O43933 1283 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 FKBP6O75344 327 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 AP1G2O75843 785 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 KDELR1P24390 212 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 LMO2P25791 158 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 RPL22P35268 128 aaKnown RBP10.2□□□□□ -0.78
TRAF1-202ENST00000540010 SLC1A6P48664 564 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 ZNF143P52747 638 aaPredicted RBP10.2□□□□□ -0.78
TRAF1-202ENST00000540010 GJA9P57773 515 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 BST1Q10588 318 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PDK4Q16654 411 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 FAM83EQ2M2I3 478 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 OTOAQ7RTW8 1153 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 FNIP1Q8TF40 1166 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PIK3R5Q8WYR1 880 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 B3GNT5Q9BYG0 378 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 RUBCNLQ9H714 662 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 ZNF229Q9UJW7 825 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 WDR27A2RRH5 827 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 C2orf71A6NGG8 1288 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 LIASO43766 372 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 AOC2O75106 756 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 AVILO75366 819 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PSMC3P17980 439 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 AMPD1P23109 780 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 ETFBP38117 255 aa10.2□□□□□ -0.78
TRAF1-202ENST00000540010 PCYT1AP49585 367 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms