RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 PCMTD1Q96MG8 357 aaPredicted RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 PTPRHQ9HD43 1115 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 ABCB8Q9NUT2 735 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 PCDHB3Q9Y5E6 796 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 H0Y8X5 98 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 SEC31AO94979 1220 aaKnown RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 MT-CO3P00414 261 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 HTR1BP28222 390 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 SMUG1Q53HV7 270 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 NAPEPLDQ6IQ20 393 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 UNC93AQ86WB7 457 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 RPRD1AQ96P16 312 aaPredicted RBP7.87□□□□□ -1.15
GNE-205ENST00000539815 SLC13A1Q9BZW2 595 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 CXCL16Q9H2A7 254 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 TMEM74BQ9NUR3 256 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 PCDHB4Q9Y5E5 795 aa7.87□□□□□ -1.15
GNE-205ENST00000539815 PTPN13Q12923 2485 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 CDX4O14627 284 aaPredicted RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 ZRANB2O95218 330 aaKnown RBP eCLIP7.86□□□□□ -1.15
GNE-205ENST00000539815 FGFR1OPO95684 399 aaKnown RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 FDPSP14324 419 aaKnown RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 IGFBP6P24592 240 aaPredicted RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 LMO2P25791 158 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 STIP1P31948 543 aaKnown RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 TKTL1P51854 596 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 NDST1P52848 882 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 TBX4P57082 545 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 CDK17Q00537 523 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 LRMPQ12912 555 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 FAXCQ5TGI0 409 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 RASSF3Q86WH2 238 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 NRSN1Q8IZ57 195 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 AHI1Q8N157 1196 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 SCAMP5Q8TAC9 235 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 LRRC3BQ96PB8 259 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 DUSP23Q9BVJ7 150 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 CCSER1Q9C0I3 900 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 MIS12Q9H081 205 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 SIK2Q9H0K1 926 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 RUBCNLQ9H714 662 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 DNAAF2Q9NVR5 837 aaKnown RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 GDAP2Q9NXN4 497 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 WSB2Q9NYS7 404 aaPredicted RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 NCKIPSDQ9NZQ3 722 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 PCDHA5Q9Y5H7 936 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 A0A1B0GVG6 124 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 A0A1W2PP55 124 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 A0A1W2PQH9 124 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 TISP43B9A030 160 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 INPP4BO15327 924 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 KIF5CO60282 957 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 TBX18O95935 607 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 NTRK1P04629 796 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 SLC2A3P11169 496 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 CCDC130P13994 396 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 CKMT2P17540 419 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 NUDT1P36639 197 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 BLKP51451 505 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 KRT83P78385 493 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 ERCC6LQ2NKX8 1250 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 OLFML1Q6UWY5 402 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 KCNK18Q7Z418 384 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 FAM186BQ8IYM0 893 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 OR2T34Q8NGX1 318 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 SNX21Q969T3 373 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 PRR11Q96HE9 360 aaPredicted RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 ACOX2Q99424 681 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 MRPL45Q9BRJ2 306 aaKnown RBP7.86□□□□□ -1.15
GNE-205ENST00000539815 TRIM4Q9C037 500 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 TMLHEQ9NVH6 421 aa7.86□□□□□ -1.15
GNE-205ENST00000539815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.86□□□□□ -1.15
GNE-205ENST00000539815 HOXC11O43248 304 aaPredicted RBP7.85□□□□□ -1.15
GNE-205ENST00000539815 H2AFXP16104 143 aaPredicted RBP7.85□□□□□ -1.15
GNE-205ENST00000539815 SNRPFP62306 86 aaKnown RBP7.85□□□□□ -1.15
GNE-205ENST00000539815 NSUN2Q08J23 767 aaKnown RBP eCLIP7.85□□□□□ -1.15
GNE-205ENST00000539815 ZNF234Q14588 700 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 NCAPHQ15003 741 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 SOWAHAQ2M3V2 549 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 KBTBD12Q3ZCT8 623 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 ALKAL1Q6UXT8 129 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 INTS8Q75QN2 995 aaKnown RBP7.85□□□□□ -1.15
GNE-205ENST00000539815 DAW1Q8N136 415 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 PPM1KQ8N3J5 372 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 FRMD1Q8N878 549 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 FAM181AQ8N9Y4 354 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 FAM81AQ8TBF8 368 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 NIF3L1Q9GZT8 377 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 CYP3A43Q9HB55 503 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 KIAA1522Q9P206 1035 aaPredicted RBP7.85□□□□□ -1.15
GNE-205ENST00000539815 SNX11Q9Y5W9 270 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 MIA3Q5JRA6 1907 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 FNDC1Q4ZHG4 1894 aaPredicted RBP7.85□□□□□ -1.15
GNE-205ENST00000539815 USP12O75317 370 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 KRT10P13645 584 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 ELOAQ14241 798 aaKnown RBP7.85□□□□□ -1.15
GNE-205ENST00000539815 KIAA0895LQ68EN5 471 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 OSTM1Q86WC4 334 aa7.85□□□□□ -1.15
GNE-205ENST00000539815 AHCYL2Q96HN2 611 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms