RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 RNF103O00237 685 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 NCAM2O15394 837 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 MTSS1O43312 755 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 DCXO43602 365 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 MATKP42679 507 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ALDH1A3P47895 512 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 AIF1P55008 147 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 SESN2P58004 480 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 IFRD2Q12894 506 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 PAFAH1B3Q15102 231 aaKnown RBP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 SLC25A52Q3SY17 297 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 CLEC14AQ86T13 490 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ACOT1Q86TX2 421 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 HPS6Q86YV9 775 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 CRYBG2Q8N1P7 616 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 KYQ8NBH2 561 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ADCY4Q8NFM4 1077 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 BFARQ9NZS9 450 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 ANKRD6Q9Y2G4 727 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 RAP2CQ9Y3L5 183 aa13.57□□□□□ -0.24
UBE3B-209ENST00000539584 A0A087WZ62 844 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 UNCXA6NJT0 531 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 BTBD19C9JJ37 291 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 SOCS7O14512 581 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 STRNO43815 780 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 PDE5AO76074 875 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 PENKP01210 267 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 GJB1P08034 283 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 FOLH1Q04609 750 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 TTLL4Q14679 1199 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 ADRM1Q16186 407 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 SH2D4BQ5SQS7 431 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 LPCAT4Q643R3 524 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 TRAPPC12Q8WVT3 735 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 PGBD4Q96DM1 585 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 CYP4F11Q9HBI6 524 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 MRPL40Q9NQ50 206 aaKnown RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 CNOT11Q9UKZ1 510 aaKnown RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 SNX9Q9Y5X1 595 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 PSAT1Q9Y617 370 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 LRRC37A2A6NM11 1700 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 LOC100653049A0A140TA62 436 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 HDAC3O15379 428 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 TADA2AO75478 443 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 KRT34O76011 436 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 CAPNS1P04632 268 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 GOT1P17174 413 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 POLD2P49005 469 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 DLG1Q12959 904 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 SNAPC2Q13487 334 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 LAMB3Q13751 1172 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 RFTN1Q14699 578 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 R3HDM1Q15032 1099 aaKnown RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 ZNF772Q68DY9 489 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 ARHGAP22Q7Z5H3 698 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 RSPH3Q86UC2 560 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 UNC5BQ8IZJ1 945 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 TDRD5Q8NAT2 981 aaKnown RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 SLC16A10Q8TF71 515 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 CCDC124Q96CT7 223 aaKnown RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 LRGUKQ96M69 825 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 TSPAN18Q96SJ8 248 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 NDNQ99608 321 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 MRPL45Q9BRJ2 306 aaKnown RBP13.56□□□□□ -0.24
UBE3B-209ENST00000539584 NMRAL1Q9HBL8 299 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 OXSMQ9NWU1 459 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 SYBUQ9NX95 663 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 PTTG2Q9NZH5 202 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 TMCO1Q9UM00 188 aa13.56□□□□□ -0.24
UBE3B-209ENST00000539584 MGAMO43451 1857 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 G3V2L1 256 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 H0YJX3 145 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 MATN2O00339 956 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 GABBR2O75899 941 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 AP2A1O95782 977 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 ARRB2P32121 409 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 NPY2RP49146 381 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 GRAMD1BQ3KR37 738 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 DALRD3Q5D0E6 543 aaKnown RBP13.55□□□□□ -0.24
UBE3B-209ENST00000539584 INTS6LQ5JSJ4 861 aaKnown RBP13.55□□□□□ -0.24
UBE3B-209ENST00000539584 ZNF410Q86VK4 478 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 PGAM4Q8N0Y7 254 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 AHI1Q8N157 1196 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 PHTF2Q8N3S3 785 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 TSNARE1Q96NA8 513 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 LENG8Q96PV6 779 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-209ENST00000539584 SLC9A7Q96T83 725 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 LGMNQ99538 433 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 B3GNT5Q9BYG0 378 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 DRC3Q9H069 523 aa13.55□□□□□ -0.24
UBE3B-209ENST00000539584 SUDS3Q9H7L9 328 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-209ENST00000539584 PADI4Q9UM07 663 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms