RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 MIOSQ9NXC5 875 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 DDX43Q9NXZ2 648 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 BAIAP2L1Q9UHR4 511 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 FBXW11Q9UKB1 542 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 CDH9Q9ULB4 789 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 GIT1Q9Y2X7 761 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 MTO1Q9Y2Z2 717 aaKnown RBP9.5□□□□□ -0.89
DDB1-211ENST00000538280 NUMBLQ9Y6R0 609 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 PTPRDP23468 1912 aa9.5□□□□□ -0.89
DDB1-211ENST00000538280 SCN5AQ14524 2016 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 PTPRSQ13332 1948 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 MYO9BQ13459 2157 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 SDR42E2A6NKP2 422 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 MEIS3P2A8K0S8 358 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 I6L893 689 aaPredicted RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 EEF2KO00418 725 aaKnown RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 SNNO75324 88 aaPredicted RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 CYP11A1P05108 521 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 RARBP10826 455 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 RAG1P15918 1043 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 PAX3P23760 479 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 RPL9P32969 192 aaKnown RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 ARFIP2P53365 341 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 OCRLQ01968 901 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 EIF4EBP2Q13542 120 aaPredicted RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 BMPR2Q13873 1038 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 DSC3Q14574 896 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 KRT72Q14CN4 511 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 TAF1BQ53T94 588 aaPredicted RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 KCTD11Q693B1 232 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 PM20D1Q6GTS8 502 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 CCSAPQ6IQ19 270 aaPredicted RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 PACS1Q6VY07 963 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 BEND5Q7L4P6 421 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 GPRIN1Q7Z2K8 1008 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 C3orf58Q8NDZ4 430 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 AGAP11Q8TF27 550 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 HDAC11Q96DB2 347 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 PTCD3Q96EY7 689 aaKnown RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 LGMNQ99538 433 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 PKMYT1Q99640 499 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 FERMT1Q9BQL6 677 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 RTP3Q9BQQ7 232 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 TRIM56Q9BRZ2 755 aaKnown RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 TACO1Q9BSH4 297 aaKnown RBP9.49□□□□□ -0.89
DDB1-211ENST00000538280 MED10Q9BTT4 135 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 TUBB6Q9BUF5 446 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 PBX4Q9BYU1 374 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 ZNF576Q9H609 170 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 ANLNQ9NQW6 1124 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 TMPRSS4Q9NRS4 437 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 TMEM30AQ9NV96 361 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 ZFP69BQ9UJL9 534 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 TBX21Q9UL17 535 aa9.49□□□□□ -0.89
DDB1-211ENST00000538280 TMEM265A0A087WTH1 108 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 WDR27A2RRH5 827 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 MYBPHLA2RUH7 354 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 YJEFN3A6XGL0 299 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 A8MUI8 341 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 E7ENQ6 273 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 FAM72CH0Y354 149 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 M0QZ92 97 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 TNFRSF10AO00220 468 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 INPPL1O15357 1258 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 NCAM2O15394 837 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 ZNF623O75123 536 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 AP1G2O75843 785 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 GSRP00390 522 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 IGLV3-25P01717 112 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 LTFP02788 710 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 AMHP03971 560 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 ATP5BP06576 529 aaKnown RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 THP07101 528 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 BPGMP07738 259 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 ACRP10323 421 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 ERCC2P18074 760 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CCND1P24385 295 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 PTPN3P26045 913 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 MGAT1P26572 445 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 TARSP26639 723 aaKnown RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 PSMB4P28070 264 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 PTPN4P29074 926 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 MLH1P40692 756 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CXCR3P49682 368 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 RASSF2P50749 326 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CLCNKBP51801 687 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 GTF2A1P52655 376 aaPredicted RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 ACLYP53396 1101 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CACNA2D1P54289 1103 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 MAP3K7CLP57077 242 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 GALNT2Q10471 571 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 BST1Q10588 318 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CRYMQ14894 314 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 SPANXN3Q5MJ09 141 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 FAM72AQ5TYM5 149 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 CES4AQ5XG92 561 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 ATG16L1Q676U5 607 aa9.48□□□□□ -0.89
DDB1-211ENST00000538280 GDF6Q6KF10 455 aaPredicted RBP9.48□□□□□ -0.89
DDB1-211ENST00000538280 FAM72DQ6L9T8 149 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms