RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TRHDEQ9UKU6 1024 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PCDHA2Q9Y5H9 948 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 SHPRHQ149N8 1683 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3DA0A087WVF3 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3IA0A087WXS9 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3EA0A087X179 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3KA0A087X1G2 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3FA6NER0 549 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3LB9A6J9 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RASSF9O75901 435 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 DNAJC8O75937 253 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 VAPBO95292 243 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RPN2P04844 631 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 EIF2S1P05198 315 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3HP0C7X1 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 HSD17B3P37058 310 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CD151P48509 253 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 GALNT3Q14435 633 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 E2F4Q16254 413 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CNGA2Q16280 664 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CYP51A1Q16850 503 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PLA2G4EQ3MJ16 856 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3GQ6DHY5 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ZNF470Q6ECI4 717 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3CQ6IPX1 549 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CYP20A1Q6UW02 462 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RASAL3Q86YV0 1011 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TBC1D3Q8IZP1 549 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 ANKRD52Q8NB46 1076 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 OR9Q1Q8NGQ5 310 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ILKAPQ9H0C8 392 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 CATSPERZQ9NTU4 200 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 TRPC4Q9UBN4 977 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PCDHB9Q9Y5E1 797 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 LOC100653049A0A140TA62 436 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RAD51BO15315 384 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 MSI1O43347 362 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 TSPAN1O60635 241 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 KRT34O76011 436 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RPL17P18621 184 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 RBL1P28749 1068 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PSMD8P48556 350 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 LONP2Q86WA8 852 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 LRRC6Q86X45 466 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 MDM1Q8TC05 714 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ELMO1Q92556 727 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 NDRG1Q92597 394 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 CASP10Q92851 521 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CXorf40BQ96DE9 158 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 MLPHQ9BV36 600 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 ATP13A3Q9H7F0 1226 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RMND5AQ9H871 391 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 WDR41Q9HAD4 459 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 VAV3Q9UKW4 847 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 DNAJC16Q9Y2G8 782 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 XRN1Q8IZH2 1706 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 SERPINI2O75830 405 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 GNRH1P01148 92 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 KRT16P08779 473 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PYGMP11217 842 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PSMB4P28070 264 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CPA2P48052 419 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CLK2P49760 499 aaKnown RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 MED21Q13503 144 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 PRSS55Q6UWB4 352 aaPredicted RBP5.47□□□□□ -1.53
LRP6-203ENST00000538239 ATAD1Q8NBU5 361 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 CLEC4DQ8WXI8 215 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 OR8D1Q8WZ84 308 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 SEMA4DQ92854 862 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 RBPJLQ9UBG7 517 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 ARL2BPQ9Y2Y0 163 aa5.47□□□□□ -1.53
LRP6-203ENST00000538239 HACD1B0YJ81 288 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 DDX3XO00571 662 aaKnown RBP eCLIP5.46□□□□□ -1.53
LRP6-203ENST00000538239 SLC2A4P14672 509 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 PGAM1P18669 254 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 MAXP61244 160 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 MMRN1Q13201 1228 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 AGBL2Q5U5Z8 902 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 HLA-DQA1Q5Y7H0 255 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 FUT10Q6P4F1 479 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 CHMP1BQ7LBR1 199 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 AMIGO3Q86WK7 504 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 CYGBQ8WWM9 190 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 CCDC126Q96EE4 140 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 PDZD7Q9H5P4 517 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 MPP6Q9NZW5 540 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 ZNF142P52746 1687 aaPredicted RBP5.46□□□□□ -1.53
LRP6-203ENST00000538239 EIF4E1BA6NMX2 242 aaKnown RBP5.46□□□□□ -1.53
LRP6-203ENST00000538239 INPP4BO15327 924 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 SERPINH1P50454 418 aaKnown RBP5.46□□□□□ -1.53
LRP6-203ENST00000538239 ACLYP53396 1101 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 TAF10Q12962 218 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 ITGA9Q13797 1035 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 FIGNQ5HY92 759 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 SPANXN3Q5MJ09 141 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 AADACL2Q6P093 401 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 ST13P4Q8IZP2 240 aaPredicted RBP5.46□□□□□ -1.53
LRP6-203ENST00000538239 TNIP2Q8NFZ5 429 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 SGSM3Q96HU1 749 aa5.46□□□□□ -1.53
LRP6-203ENST00000538239 VPS50Q96JG6 964 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms