RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 NEMP1O14524 444 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 TXNDC9O14530 226 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 MPSTP25325 297 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 EPHA3P29320 983 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 MTTPP55157 894 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 KLF10Q13118 480 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 DCAF15Q66K64 600 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 FSTL4Q6MZW2 842 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 LRRC8BQ6P9F7 803 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 TMEM151AQ8N4L1 468 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLPB-209ENST00000538039 MFSD3Q96ES6 412 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 DNAJC28Q9NX36 388 aa14.44□□□□□ -0.1
CLPB-209ENST00000538039 AIM2O14862 343 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 GLRA3O75311 464 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 CPA3P15088 417 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 PKNOX1P55347 436 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 SNAPC2Q13487 334 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 RIOX2Q8IUF8 465 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 FAM156AQ8NDB6 213 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 FAM192AQ9GZU8 254 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 MRPL42Q9Y6G3 142 aaKnown RBP14.43□□□□□ -0.1
CLPB-209ENST00000538039 RPS6KL1Q9Y6S9 549 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 USP2O75604 605 aaPredicted RBP14.43□□□□□ -0.1
CLPB-209ENST00000538039 BEST1O76090 585 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 KLHL2O95198 593 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 XRCC1P18887 633 aaPredicted RBP14.43□□□□□ -0.1
CLPB-209ENST00000538039 ATICP31939 592 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 NDUFV1P49821 464 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 THOP1P52888 689 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 TMEM62Q0P6H9 643 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 MED21Q13503 144 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 VGLL4Q14135 290 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 ZRSR2Q15696 482 aaKnown RBP14.43□□□□□ -0.1
CLPB-209ENST00000538039 TBCCQ15814 346 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 MMEL1Q495T6 779 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 USP13Q92995 863 aaPredicted RBP14.43□□□□□ -0.1
CLPB-209ENST00000538039 NDNQ99608 321 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 TNS1Q9HBL0 1735 aaKnown RBP14.43□□□□□ -0.1
CLPB-209ENST00000538039 VILLO15195 856 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 SPTLC1O15269 473 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 ZNF286BP0CG31 522 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 TGFB3P10600 412 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 TKTP29401 623 aaKnown RBP14.43□□□□□ -0.1
CLPB-209ENST00000538039 GRAMD1BQ3KR37 738 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 SPATA6LQ8N4H0 392 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 FAM167AQ96KS9 214 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 CAMKK2Q96RR4 588 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 HAPLN3Q96S86 360 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 PRDM12Q9H4Q4 367 aa14.43□□□□□ -0.1
CLPB-209ENST00000538039 DNAJA2O60884 412 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 TFAP2AP05549 437 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 PIM1P11309 404 aaPredicted RBP14.42□□□□□ -0.1
CLPB-209ENST00000538039 TPH1P17752 444 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 CDKL1Q00532 357 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 CERCAMQ5T4B2 595 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 STXBP5Q5T5C0 1151 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 CYS1Q717R9 158 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 PNPLA1Q8N8W4 532 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 NAT14Q8WUY8 206 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 DCDC2Q9UHG0 476 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 AKT3Q9Y243 479 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 ZCWPW2A0A1B0GU75 182 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 TK2O00142 265 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 TSPAN1O60635 241 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 PABPC4LP0CB38 370 aaKnown RBP14.42□□□□□ -0.1
CLPB-209ENST00000538039 MCF2P10911 925 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 GLDCP23378 1020 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 MRPS22P82650 360 aaKnown RBP14.42□□□□□ -0.1
CLPB-209ENST00000538039 RBP5P82980 135 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 LSAMPQ13449 338 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 SYPL2Q5VXT5 272 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 CERS2Q96G23 380 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 GATA5Q9BWX5 397 aaPredicted RBP14.42□□□□□ -0.1
CLPB-209ENST00000538039 EIF2AQ9BY44 585 aaKnown RBP14.42□□□□□ -0.1
CLPB-209ENST00000538039 CDH19Q9H159 772 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 ASB7Q9H672 318 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 CDHR5Q9HBB8 845 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 SNTG2Q9NY99 539 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 MORF4L1Q9UBU8 362 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 GTF2IRD1Q9UHL9 959 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 SORCS3Q9UPU3 1222 aa14.42□□□□□ -0.1
CLPB-209ENST00000538039 C15orf38-AP3S2A0A0A6YYH1 394 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 PGAM1P18669 254 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 ALDH1A3P47895 512 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 HSP90AA5PQ58FG0 334 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 OGFRL1Q5TC84 451 aaPredicted RBP14.41□□□□□ -0.1
CLPB-209ENST00000538039 HFE2Q6ZVN8 426 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 ARPINQ7Z6K5 226 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 STRA8Q7Z7C7 330 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 CCNYQ8ND76 341 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 OR6B3Q8NGW1 331 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLPB-209ENST00000538039 KBTBD7Q8WVZ9 684 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 APBB2Q92870 758 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 DMAP1Q9NPF5 467 aaPredicted RBP14.41□□□□□ -0.1
CLPB-209ENST00000538039 UBP1Q9NZI7 540 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
CLPB-209ENST00000538039 SSX2IPQ9Y2D8 614 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms