RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 CCDC126Q96EE4 140 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 OTUB1Q96FW1 271 aaPredicted RBP4.16□□□□□ -1.74
SEC23A-202ENST00000537403 ZCWPW1Q9H0M4 648 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 NXF3Q9H4D5 531 aaKnown RBP4.16□□□□□ -1.74
SEC23A-202ENST00000537403 IGFLR1Q9H665 355 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 YY1AP1Q9H869 796 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 IL1RL2Q9HB29 575 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 CHCHD3Q9NX63 227 aaKnown RBP4.16□□□□□ -1.74
SEC23A-202ENST00000537403 KIF17Q9P2E2 1029 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 OR12D3Q9UGF7 316 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 SLC24A2Q9UI40 661 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 ZNF112Q9UJU3 913 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 TRHDEQ9UKU6 1024 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 CDH9Q9ULB4 789 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 PNMA8BQ9ULN7 279 aaPredicted RBP4.16□□□□□ -1.74
SEC23A-202ENST00000537403 PCDHB3Q9Y5E6 796 aa4.16□□□□□ -1.74
SEC23A-202ENST00000537403 PLXNA1Q9UIW2 1896 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 LAMA4Q16363 1823 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 SZT2Q5T011 3432 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 RBAK-RBAKDNI3L0D1 243 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 KPNA3O00505 521 aaPredicted RBP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 RBP1P09455 135 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 DARSP14868 501 aaKnown RBP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 IGFBP4P22692 258 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 RPL9P32969 192 aaKnown RBP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 GRM5P41594 1212 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 BRCC3P46736 316 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 POLE2P56282 527 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 KCNK10P57789 538 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 WASHC5Q12768 1159 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 INPP5AQ14642 412 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 RRP1BQ14684 758 aaKnown RBP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 STARD3Q14849 445 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 KRT72Q14CN4 511 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 BMT2Q1RMZ1 405 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 ATP13A4Q4VNC1 1196 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 RARS2Q5T160 578 aaKnown RBP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 TPGS1Q6ZTW0 290 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 AGGF1Q8N302 714 aaeCLIP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 TMEM199Q8N511 208 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 LRRC52Q8N7C0 313 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 C12orf29Q8N999 325 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 GANQ9H2C0 597 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 OSGEPL1Q9H4B0 414 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 GID8Q9NWU2 228 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 THG1LQ9NWX6 298 aaKnown RBP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 SAE1Q9UBE0 346 aaPredicted RBP4.15□□□□□ -1.74
SEC23A-202ENST00000537403 NAALADL1Q9UQQ1 740 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 PCDHGC5Q9Y5F6 944 aa4.15□□□□□ -1.74
SEC23A-202ENST00000537403 SMIM35A0A1B0GVV1 85 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 CCT8L1PA6NM43 557 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 TRPC5OSA6NMA1 111 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 ERI2A8K979 691 aaKnown RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 TREHO43280 583 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 ALDH1A2O94788 518 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 DDHD2O94830 711 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 PDHA1P08559 390 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 ZSCAN5DPP0CG00 497 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 CPA3P15088 417 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 H2AFXP16104 143 aaPredicted RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 MGAT1P26572 445 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 EEF1DP29692 281 aaKnown RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 PBLDP30039 288 aaPredicted RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 GP5P40197 560 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 RPL21P46778 160 aaKnown RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 CD151P48509 253 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 ZNF135P52742 658 aaPredicted RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 PLIN5Q00G26 463 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 FMO1Q01740 532 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 STX5Q13190 355 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 MAMLD1Q13495 774 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 LRRC36Q1X8D7 754 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 HECTD3Q5T447 861 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 PPP4R4Q6NUP7 873 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 CES3Q6UWW8 571 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 PRPF39Q86UA1 669 aaKnown RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 CACUL1Q86Y37 369 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 CREG2Q8IUH2 290 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 FIBCD1Q8N539 461 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 ZNF384Q8TF68 577 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 BAP1Q92560 729 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 C18orf25Q96B23 403 aaPredicted RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 LENG9Q96B70 501 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 NAF1Q96HR8 494 aaKnown RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 VAT1Q99536 393 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 TRIM4Q9C037 500 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 C10orf88Q9H8K7 445 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 TMEM161AQ9NX61 479 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 NCKIPSDQ9NZQ3 722 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 COL20A1Q9P218 1284 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 HEY2Q9UBP5 337 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 UBA2Q9UBT2 640 aaPredicted RBP4.15□□□□□ -1.75
SEC23A-202ENST00000537403 SEPT3Q9UH03 358 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 FAM153AQ9UHL3 310 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 LNPEPQ9UIQ6 1025 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 PHTF1Q9UMS5 762 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 GIT1Q9Y2X7 761 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 FAM95CA0A1B0GW59 222 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 CARNS1A5YM72 827 aa4.15□□□□□ -1.75
SEC23A-202ENST00000537403 VGLL3A8MV65 326 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms