RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 FOXB2Q5VYV0 432 aa13.21□□□□□ -0.29
TRIM25-202ENST00000537230 TREML1Q86YW5 311 aa13.21□□□□□ -0.29
TRIM25-202ENST00000537230 C2orf69Q8N8R5 385 aa13.21□□□□□ -0.29
TRIM25-202ENST00000537230 TUBB6Q9BUF5 446 aa13.21□□□□□ -0.29
TRIM25-202ENST00000537230 XAB2Q9HCS7 855 aaKnown RBP13.21□□□□□ -0.29
TRIM25-202ENST00000537230 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
TRIM25-202ENST00000537230 MARCOQ9UEW3 520 aaPredicted RBP13.21□□□□□ -0.29
TRIM25-202ENST00000537230 SCOCQ9UIL1 159 aa13.21□□□□□ -0.29
TRIM25-202ENST00000537230 B2RBV5 119 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 DEUP1Q05D60 604 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 DPYSQ14117 519 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 AP1ARQ63HQ0 302 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 C16orf46Q6P387 395 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 NPWQ8N729 165 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 EDEM1Q92611 657 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 AGAP3Q96P47 875 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 GORASP1Q9BQQ3 440 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 WDR6Q9NNW5 1121 aaKnown RBP13.21□□□□□ -0.3
TRIM25-202ENST00000537230 SYBUQ9NX95 663 aa13.21□□□□□ -0.3
TRIM25-202ENST00000537230 CASTOR2A6NHX0 329 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 ALDOAP04075 364 aaKnown RBP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 ENO1P06733 434 aaKnown RBP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 CCNFP41002 786 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 CCNJLQ8IV13 435 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 DDX50Q9BQ39 737 aaKnown RBP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 ST3GAL5Q9UNP4 418 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 E2F8A0AVK6 867 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 KRT38O76015 456 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 TGDSO95455 350 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 KITP10721 976 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 HOXC8P31273 242 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 KRT72Q14CN4 511 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 CHI3L2Q15782 390 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 PPFIBP2Q8ND30 876 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 MAGED2Q9UNF1 606 aaPredicted RBP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 CDY2AQ9Y6F7 541 aa13.2□□□□□ -0.3
TRIM25-202ENST00000537230 MKI67P46013 3256 aaKnown RBP13.2□□□□□ -0.3
TRIM25-202ENST00000537230 ANKRD33BA6NCL7 494 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 EEF2KO00418 725 aaKnown RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 DCLK1O15075 740 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 GSRP00390 522 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 UBTFL6P0CB48 400 aaPredicted RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 FAM200BP0CF97 657 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ERCC2P18074 760 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ADRA1BP35368 520 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 TMPRSS15P98073 1019 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 KDSRQ06136 332 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 C4orf22Q6V702 233 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 FAM35AQ86V20 835 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 RBM15BQ8NDT2 890 aaKnown RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 FAM105AQ9NUU6 356 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 SNUPNO95149 360 aaKnown RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 NCAM1P13591 858 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 CTGFP29279 349 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 SCNN1GP51170 649 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 POLE2P56282 527 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 DAOAP59103 153 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 TAF1CQ15572 869 aaPredicted RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 TEX44Q53QW1 395 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ZNF184Q99676 751 aaPredicted RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 MMADHCQ9H3L0 296 aaPredicted RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 SIRPGQ9P1W8 387 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 RCOR3Q9P2K3 495 aaPredicted RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 PPARGC1AQ9UBK2 798 aaKnown RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 SDR42E2A6NKP2 422 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 MAP3K7O43318 606 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ALDH1A2O94788 518 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 GLUD2P49448 558 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 HUNKP57058 714 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 FKBP1BP68106 108 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 PPM1JQ5JR12 505 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 STEAP4Q687X5 459 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 CWF19L1Q69YN2 538 aaKnown RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 LRRC8BQ6P9F7 803 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ATG14Q6ZNE5 492 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 BHLHA9Q7RTU4 235 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 OR52K1Q8NGK4 314 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 GATA6Q92908 595 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 FCRL3Q96P31 734 aaPredicted RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 AGO3Q9H9G7 860 aaKnown RBP13.19□□□□□ -0.3
TRIM25-202ENST00000537230 EMCNQ9ULC0 261 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 STAP1Q9ULZ2 295 aa13.19□□□□□ -0.3
TRIM25-202ENST00000537230 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms