RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TXLNGQ9NUQ3 528 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 NSMCE4AQ9NXX6 385 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 SCML2Q9UQR0 700 aa13.92□□□□□ -0.18
SMG6-203ENST00000536871 ARVCFO00192 962 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 BIRC5O15392 142 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 ATP5BP06576 529 aaKnown RBP13.91□□□□□ -0.18
SMG6-203ENST00000536871 NEFHP12036 1026 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 SELPP16109 830 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 ADRA1DP25100 572 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 BNIP1Q12981 228 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 MTM1Q13496 603 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 DEFB115Q30KQ5 88 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
SMG6-203ENST00000536871 SYCP2LQ5T4T6 812 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 MSANTD2Q6P1R3 559 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 FAM47EQ6ZV65 393 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 LRRTM3Q86VH5 581 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 KLHDC8BQ8IXV7 354 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 NUP93Q8N1F7 819 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 SERAC1Q96JX3 654 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 CAPNS2Q96L46 248 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 TEKT5Q96M29 485 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 SRPK1Q96SB4 655 aaKnown RBP13.91□□□□□ -0.18
SMG6-203ENST00000536871 TUBB6Q9BUF5 446 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 TRIM55Q9BYV6 548 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 IL22Q9GZX6 179 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 PLAC1Q9HBJ0 212 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 CASS4Q9NQ75 786 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 OLA1Q9NTK5 396 aaKnown RBP13.91□□□□□ -0.18
SMG6-203ENST00000536871 TMLHEQ9NVH6 421 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 PLLPQ9Y342 182 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 PCDHB5Q9Y5E4 795 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 WDR27A2RRH5 827 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 TADA2AO75478 443 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 USP1O94782 785 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 YY1P25490 414 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 HNRNPH1P31943 449 aaKnown RBP13.91□□□□□ -0.18
SMG6-203ENST00000536871 HADHAP40939 763 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 CDK18Q07002 472 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 NIPAL4Q0D2K0 466 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 CRYMQ14894 314 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 INSCQ1MX18 579 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 ZNF280DQ6N043 979 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
SMG6-203ENST00000536871 CEP295NLQ96MC4 621 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 LRRC37BQ96QE4 947 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 CPNE1Q99829 537 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 TMPRSS4Q9NRS4 437 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 TBC1D13Q9NVG8 400 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 GRID1Q9ULK0 1009 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 PHF24Q9UPV7 400 aa13.91□□□□□ -0.18
SMG6-203ENST00000536871 A0A1W2PQ45 241 aaPredicted RBP13.9□□□□□ -0.18
SMG6-203ENST00000536871 A0A1W2PQY0 241 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 C2CD2LO14523 706 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 CACNG3O60359 315 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 RFPL1O75677 317 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 ANXA9O76027 345 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
SMG6-203ENST00000536871 MGAT1P26572 445 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 SERPINB4P48594 390 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 RASSF2P50749 326 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 MNAT1P51948 309 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 SESN2P58004 480 aaPredicted RBP13.9□□□□□ -0.18
SMG6-203ENST00000536871 ANO4Q32M45 955 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 GRTP1Q5TC63 336 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 MANEALQ5VSG8 457 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 KCTD11Q693B1 232 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 CGB2Q6NT52 195 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 LRRC8DQ7L1W4 858 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 RTN4RL1Q86UN2 441 aaPredicted RBP13.9□□□□□ -0.18
SMG6-203ENST00000536871 ZNF276Q8N554 614 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 C2orf15Q8WU43 125 aaKnown RBP13.9□□□□□ -0.18
SMG6-203ENST00000536871 ARNTL2Q8WYA1 636 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 FATE1Q969F0 183 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 OXNAD1Q96HP4 312 aaPredicted RBP13.9□□□□□ -0.18
SMG6-203ENST00000536871 TSSK1BQ9BXA7 367 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 MRPL9Q9BYD2 267 aaKnown RBP13.9□□□□□ -0.18
SMG6-203ENST00000536871 RHOBTB2Q9BYZ6 727 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 ANLNQ9NQW6 1124 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 ABCF3Q9NUQ8 709 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 VANGL2Q9ULK5 521 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 TLR6Q9Y2C9 796 aa13.9□□□□□ -0.18
SMG6-203ENST00000536871 TDRD15B5MCY1 1934 aaKnown RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 FAM237BA0A1B0GVD1 139 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 ARHGAP42A6NI28 874 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 CXorf49A8MYA2 514 aaPredicted RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 GOLGA8RI6L899 631 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 KCNK1O00180 336 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 GLRA3O75311 464 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 RASSF9O75901 435 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
SMG6-203ENST00000536871 CSH1P0DML2 217 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 CSH2P0DML3 217 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 GP5P40197 560 aa13.89□□□□□ -0.19
SMG6-203ENST00000536871 OR1G1P47890 313 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms