RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 CCSER2Q9H7U1 834 aa11.14□□□□□ -0.63
UBE3B-205ENST00000535900 ZWILCHQ9H900 591 aa11.14□□□□□ -0.63
UBE3B-205ENST00000535900 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE3B-205ENST00000535900 THG1LQ9NWX6 298 aaKnown RBP11.14□□□□□ -0.63
UBE3B-205ENST00000535900 GTSE1Q9NYZ3 720 aa11.14□□□□□ -0.63
UBE3B-205ENST00000535900 CDV3Q9UKY7 258 aaKnown RBP11.14□□□□□ -0.63
UBE3B-205ENST00000535900 AP4E1Q9UPM8 1137 aa11.14□□□□□ -0.63
UBE3B-205ENST00000535900 UQCRHLA0A096LP55 91 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 GOLGA6L10A0A0M3HER8 536 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 SLC12A8A0AV02 714 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 H3BRJ5 948 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 UQCRHP07919 91 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 PYGMP11217 842 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 TDGF1P13385 188 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 TCF3P15923 654 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 CDKN2BP42772 138 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 MARCKSL1P49006 195 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 SLC11A2P49281 568 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 MLLT6P55198 1093 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-205ENST00000535900 CDH6P55285 790 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 PITX1P78337 314 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-205ENST00000535900 LMNB2Q03252 620 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 PON2Q15165 354 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 ZC3H12AQ5D1E8 599 aaKnown RBP11.13□□□□□ -0.63
UBE3B-205ENST00000535900 DGKKQ5KSL6 1271 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 DCAF12L1Q5VU92 463 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 LAIR1Q6GTX8 287 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 TXNDC11Q6PKC3 985 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 SPOCD1Q6ZMY3 1216 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 MIB1Q86YT6 1006 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 CCDC50Q8IVM0 306 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 SPEM1Q8N4L4 309 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 CELF5Q8N6W0 485 aaKnown RBP11.13□□□□□ -0.63
UBE3B-205ENST00000535900 TTC13Q8NBP0 860 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 ADAM32Q8TC27 787 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 COG1Q8WTW3 980 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 FAF2Q96CS3 445 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 PEBP4Q96S96 227 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 KLF16Q9BXK1 252 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-205ENST00000535900 MAK16Q9BXY0 300 aaKnown RBP11.13□□□□□ -0.63
UBE3B-205ENST00000535900 OSBPL8Q9BZF1 889 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 TKTL2Q9H0I9 626 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 SMG9Q9H0W8 520 aaKnown RBP11.13□□□□□ -0.63
UBE3B-205ENST00000535900 KIF9Q9HAQ2 790 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 CALCOCO1Q9P1Z2 691 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 SFMBT1Q9UHJ3 866 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 RASAL2Q9UJF2 1139 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 ARHGAP26Q9UNA1 814 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 OTOGLQ3ZCN5 2332 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
UBE3B-205ENST00000535900 SYNJ2BP-COX16A0A087WUM0 186 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 MED19A0JLT2 244 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 C3orf70A6NLC5 250 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 CHURC1-FNTBB4DL54 471 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 CCDC188H7C350 402 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 FGF10O15520 208 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 TBX18O95935 607 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 FGGP02679 453 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 MBL2P11226 248 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 TCF4P15884 667 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 SDHBP21912 280 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 CXCR5P32302 372 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 GJC1P36383 396 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 FNTBP49356 437 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 DNA2P51530 1060 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 TNK2Q07912 1038 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 SEMA3BQ13214 749 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 DPYSL3Q14195 570 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 SMTNL2Q2TAL5 461 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 ITPRIPL2Q3MIP1 535 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 GLE1Q53GS7 698 aaKnown RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 KCNT1Q5JUK3 1230 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 DAB2IPQ5VWQ8 1189 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 TXNDC8Q6A555 127 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 HEATR6Q6AI08 1181 aaKnown RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 CCDC70Q6NSX1 233 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 LRRC31Q6UY01 552 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 BZW1Q7L1Q6 419 aaKnown RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 CPNE8Q86YQ8 564 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 SLC13A5Q86YT5 568 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 CMTM8Q8IZV2 173 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 MMGT1Q8N4V1 131 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 CCDC185Q8N715 623 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 SPATA4Q8NEY3 305 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 RAPGEF5Q92565 580 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 TSC1Q92574 1164 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 HSPH1Q92598 858 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 RUNDC3BQ96NL0 473 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 LRRC3BQ96PB8 259 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 DHX35Q9H5Z1 703 aaKnown RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 PCDH18Q9HCL0 1135 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 TRPC7Q9HCX4 862 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 DLL3Q9NYJ7 618 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 COX16Q9P0S2 106 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 STIM2Q9P246 746 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
UBE3B-205ENST00000535900 OR12D3Q9UGF7 316 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 STOML2Q9UJZ1 356 aa11.12□□□□□ -0.63
UBE3B-205ENST00000535900 LSM7Q9UK45 103 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms