RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 OR2T34Q8NGX1 318 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 OR14C36Q8NHC7 312 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 CLEC4CQ8WTT0 213 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 ZNF606Q8WXB4 792 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 OR8D1Q8WZ84 308 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 KAT5Q92993 513 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 TTC17Q96AE7 1141 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 FCRL2Q96LA5 508 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 RPRD1AQ96P16 312 aaPredicted RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 NUCKS1Q9H1E3 243 aaKnown RBP13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 DYRK4Q9NR20 520 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 DDIT4Q9NX09 232 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 APEX2Q9UBZ4 518 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3DA0A087WVF3 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3IA0A087WXS9 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3EA0A087X179 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3KA0A087X1G2 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 A0A1B0GVM2 712 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 A0A1W2PP55 124 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3FA6NER0 549 aaPredicted RBP13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TCAF2A6NFQ2 919 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 KCNU1A8MYU2 1149 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 PPP1R3GB7ZBB8 358 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3LB9A6J9 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 E5RJQ4 531 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TNFSF14O43557 240 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 SIN3BO75182 1162 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 GJB3O75712 270 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 ITGAVP06756 1048 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3HP0C7X1 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 SLC8A1P32418 973 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 HNF1BP35680 557 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 NUDT1P36639 197 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 PI4KAP42356 2102 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 MARSP56192 900 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 PDCLQ13371 301 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 ZC3H12AQ5D1E8 599 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3GQ6DHY5 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 SMYD5Q6GMV2 418 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 OR6B2Q6IFH4 312 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3CQ6IPX1 549 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 TBC1D3Q8IZP1 549 aaPredicted RBP13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 PPP1R13BQ96KQ4 1090 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 SPAG5Q96R06 1193 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 RRN3Q9NYV6 651 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 RWDD2AQ9UIY3 292 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 FNDC3AQ9Y2H6 1198 aaKnown RBP13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 SNX11Q9Y5W9 270 aa13.68□□□□□ -0.22
CLSTN3-205ENST00000535452 A0A1W2PPC4 97 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 SRRM3A6NNA2 597 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 MID1O15344 667 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 PDGFRAP16234 1089 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 GOT1P17174 413 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 CD38P28907 300 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 RECQLP46063 649 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 SGSHP51688 502 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 KRT83P78385 493 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 NME3Q13232 169 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 ACBD5Q5T8D3 534 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 TRIM65Q6PJ69 517 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 C11orf57Q6ZUT1 292 aaPredicted RBP13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 TMEM110Q86TL2 294 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 ZDHHC17Q8IUH5 632 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 PNPLA1Q8N8W4 532 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 CRACR2AQ9BSW2 395 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 SLC4A5Q9BY07 1137 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 MUC3BQ9H195 1237 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 IL21RQ9HBE5 538 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 ASNSD1Q9NWL6 643 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 VPS28Q9UK41 221 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 WASF3Q9UPY6 502 aa13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 MAP1BP46821 2468 aaKnown RBP13.67□□□□□ -0.22
CLSTN3-205ENST00000535452 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 GON4LQ3T8J9 2241 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 CHD8Q9HCK8 2581 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 EIF4E1BA6NMX2 242 aaKnown RBP13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 VILLO15195 856 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 PCDHGA12O60330 932 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 UBE2HP62256 183 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 FAM193AP78312 1265 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 SCAPQ12770 1279 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 STAT4Q14765 748 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 ARID5BQ14865 1188 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 NCEH1Q6PIU2 408 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 MLKLQ8NB16 471 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 SLC39A13Q96H72 371 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 SERAC1Q96JX3 654 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 PRICKLE1Q96MT3 831 aaPredicted RBP13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 CNTN6Q9UQ52 1028 aa13.66□□□□□ -0.22
CLSTN3-205ENST00000535452 ASCC3Q8N3C0 2202 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms