RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 TTLL4Q14679 1199 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 MVPQ14764 893 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 POU6F1Q14863 301 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 HERC3Q15034 1050 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TAF12Q16514 161 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PPP2R5EQ16537 467 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 DPYSL2Q16555 572 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 EDRF1Q3B7T1 1238 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 HP1BP3Q5SSJ5 553 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 AGAP7PQ5VUJ5 663 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 MAP1SQ66K74 1059 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 KRT40Q6A162 431 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TMEM132EQ6IEE7 984 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PLEKHA7Q6IQ23 1121 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NSMFQ6X4W1 530 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 LINC00299Q6ZSB3 139 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 HS2ST1Q7LGA3 356 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ZSWIM9Q86XI8 627 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TMEM139Q8IV31 216 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 DCP1BQ8IZD4 617 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ADGRG5Q8IZF4 528 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ADSSL1Q8N142 457 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 CBARPQ8N350 705 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 MMGT1Q8N4V1 131 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TBC1D19Q8N5T2 526 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 ARFGAP1Q8N6T3 406 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NIPA2Q8N8Q9 360 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TRPV1Q8NER1 839 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 RAB3IL1Q8TBN0 382 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 AGR3Q8TD06 166 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 GPBAR1Q8TDU6 330 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 SYTL5Q8TDW5 730 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 RNF139Q8WU17 664 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 WASF1Q92558 559 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 FERMT2Q96AC1 680 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 DACT3Q96B18 629 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TUBGCP3Q96CW5 907 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 RADILQ96JH8 1075 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 B3GALT6Q96L58 329 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TWNKQ96RR1 684 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NAPGQ99747 312 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NUDT16L1Q9BRJ7 211 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TRIM62Q9BVG3 475 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PINK1Q9BXM7 581 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 DCLK3Q9C098 648 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 LRMDAQ9H2I8 198 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 TLE6Q9H808 572 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 USP29Q9HBJ7 922 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 CAPN10Q9HC96 672 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 C20orf96Q9NUD7 363 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 BLOC1S4Q9NUP1 217 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 MCM9Q9NXL9 1143 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 NCKIPSDQ9NZQ3 722 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 HMG20BQ9P0W2 317 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 RSL24D1Q9UHA3 163 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 IPO11Q9UI26 975 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 GAB2Q9UQC2 676 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 UTP11Q9Y3A2 253 aaKnown RBP5.33□□□□□ -1.56
SNHG1-201ENST00000535076 PCDHGA2Q9Y5H1 932 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 CAPN6Q9Y6Q1 641 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 DGKBQ9Y6T7 804 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 BICRAQ9NZM4 1560 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 WDR62O43379 1518 aa5.33□□□□□ -1.56
SNHG1-201ENST00000535076 FANCAO15360 1455 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 UHRF1BP1Q6BDS2 1440 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 A0A1W2PP64 1363 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 UMODL1Q5DID0 1318 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 SALL1Q9NSC2 1324 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 A8MX80 341 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 FAM25AB3EWG3 89 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 FAM25CB3EWG5 89 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 FAM25GB3EWG6 89 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 H3BNX3 289 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 CASC3O15234 703 aaKnown RBP5.32□□□□□ -1.56
SNHG1-201ENST00000535076 SLC22A2O15244 555 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 BRINP1O60477 761 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 LEFTY1O75610 366 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 CDC123O75794 336 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-201ENST00000535076 SNAP29O95721 258 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 SCGB1D2O95969 90 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 OPN1LWP04000 364 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 FUCA1P04066 466 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 GALTP07902 379 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 USP17L7P0C7H9 530 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 HSMCR30P0CW71 290 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 CPA1P15085 419 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 GJA1P17302 382 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 PLCG1P19174 1290 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 CCNA2P20248 432 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 RAB4AP20338 218 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 ETV5P41161 510 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 HTR2BP41595 481 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 CCT3P49368 545 aaKnown RBP5.32□□□□□ -1.56
SNHG1-201ENST00000535076 SLC26A2P50443 739 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 RENBPP51606 427 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 SEC24CP53992 1094 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 PURAQ00577 322 aaKnown RBP5.32□□□□□ -1.56
SNHG1-201ENST00000535076 AMPD2Q01433 879 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 GRIN1Q05586 938 aa5.32□□□□□ -1.56
SNHG1-201ENST00000535076 PTPN11Q06124 597 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms