RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CCDC50Q8IVM0 306 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 CARNMT1Q8N4J0 409 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 NAT16Q8N8M0 369 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 RTL3Q8N8U3 475 aaKnown RBP12.26□□□□□ -0.45
COMMD9-208ENST00000533643 WFDC5Q8TCV5 224 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 CSGALNACT1Q8TDX6 532 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 HERPUD2Q9BSE4 406 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 HEMGNQ9BXL5 484 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 OSBPL8Q9BZF1 889 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 CARD9Q9H257 536 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 RETREG1Q9H6L5 497 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 CATSPERBQ9H7T0 1116 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 NDFIP2Q9NV92 336 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 TMEM248Q9NWD8 314 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 SNX12Q9UMY4 172 aa12.26□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.25□□□□□ -0.45
COMMD9-208ENST00000533643 TYW5A2RUC4 315 aaKnown RBP12.25□□□□□ -0.45
COMMD9-208ENST00000533643 ESPNB1AK53 854 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 CACNG3O60359 315 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 LUC7L3O95232 432 aaKnown RBP12.25□□□□□ -0.45
COMMD9-208ENST00000533643 SRFP11831 508 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 CASQ1P31415 396 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 GJA4P35212 333 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 CETN2P41208 172 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 SLC6A11P48066 632 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 ADCY2Q08462 1091 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF177Q13360 481 aaPredicted RBP12.25□□□□□ -0.45
COMMD9-208ENST00000533643 TFDP2Q14188 446 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 TFDP3Q5H9I0 405 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 SLC9A4Q6AI14 798 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
COMMD9-208ENST00000533643 C12orf40Q86WS4 652 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 RFX6Q8HWS3 928 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 FIBINQ8TAL6 211 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 COG1Q8WTW3 980 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 DNASE1L2Q92874 299 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 CHFRQ96EP1 664 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 PBKQ96KB5 322 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 OSBPL9Q96SU4 736 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 MAK16Q9BXY0 300 aaKnown RBP12.25□□□□□ -0.45
COMMD9-208ENST00000533643 SLC2A11Q9BYW1 496 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 KLC2Q9H0B6 622 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 NOL6Q9H6R4 1146 aaKnown RBP12.25□□□□□ -0.45
COMMD9-208ENST00000533643 PRDM16Q9HAZ2 1276 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 CD320Q9NPF0 282 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 SLC2A4RGQ9NR83 387 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 FBXO10Q9UK96 956 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 SORCS3Q9UPU3 1222 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 EFR3BQ9Y2G0 817 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 TBC1D30Q9Y2I9 924 aa12.25□□□□□ -0.45
COMMD9-208ENST00000533643 H0Y626 953 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 KIF2AO00139 706 aaPredicted RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 TRIM24O15164 1050 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF500O60304 480 aaPredicted RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 CEP104O60308 925 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 TUBB4AP04350 444 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 CISD3P0C7P0 127 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 PRLRP16471 622 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 OR1E1P30953 314 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 OPRD1P41143 372 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 SOX9P48436 509 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 MAPKAPK2P49137 400 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 AMPD2Q01433 879 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 PAFAH1B3Q15102 231 aaKnown RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 FSCBQ5H9T9 825 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 IER5LQ5T953 404 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 SEL1L2Q5TEA6 688 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 AFMIDQ63HM1 303 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 KAZNQ674X7 775 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 NAIF1Q69YI7 327 aaPredicted RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 CXorf57Q6NSI4 855 aaKnown RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 BBS12Q6ZW61 710 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 MFN1Q8IWA4 741 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 GJD3Q8N144 294 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 UMODL1-AS1Q8N2C9 162 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 PLD5Q8N7P1 536 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 OR52K2Q8NGK3 314 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 LMLNQ96KR4 655 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 NECAB3Q96P71 396 aaPredicted RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 XPO6Q96QU8 1125 aaKnown RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 DNAJC17Q9NVM6 304 aaKnown RBP12.24□□□□□ -0.45
COMMD9-208ENST00000533643 DUSP12Q9UNI6 340 aa12.24□□□□□ -0.45
COMMD9-208ENST00000533643 TCRBV7S2A1N4TA0A589 114 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 ILVBLA1L0T0 632 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 CES2O00748 559 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 APOL1O14791 398 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 ZNF185O15231 689 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 CST8O60676 142 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 TULP3O75386 442 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 TCP1P17987 556 aaKnown RBP12.23□□□□□ -0.45
COMMD9-208ENST00000533643 HLA-FP30511 346 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 CD70P32970 193 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 DYNLT1P63172 113 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 PFKPQ01813 784 aa12.23□□□□□ -0.45
COMMD9-208ENST00000533643 MESP2Q0VG99 397 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms