RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ACOX2Q99424 681 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 EIF3CQ99613 913 aaKnown RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 BAG1Q99933 345 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 OSGEPQ9NPF4 335 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 PPARGC1AQ9UBK2 798 aaKnown RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 ZNF212Q9UDV6 495 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 PCSK1NQ9UHG2 260 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 RAPGEFL1Q9UHV5 662 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 FBXO4Q9UKT5 387 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 MMP17Q9ULZ9 603 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 TBC1D30Q9Y2I9 924 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 EPN1Q9Y6I3 576 aaPredicted RBP12.35□□□□□ -0.43
SSBP3-214ENST00000533209 CACNA1IQ9P0X4 2223 aa12.35□□□□□ -0.43
SSBP3-214ENST00000533209 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 K7ESF4 209 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 SGK1O00141 431 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 MYO1FO00160 1098 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 TIMM44O43615 452 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 PRPSAP2O60256 369 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 MTA2O94776 668 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 LRIG2O94898 1065 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 TCF4P15884 667 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 COL9A1P20849 921 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 IL1R2P27930 398 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 MZF1P28698 734 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 L1CAMP32004 1257 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 MAGEA1P43355 309 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 CSTF1Q05048 431 aaKnown RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 ZNF177Q13360 481 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 DMC1Q14565 340 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 CA9Q16790 459 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 PLEKHG6Q3KR16 790 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 PITRM1Q5JRX3 1037 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 MBLAC2Q68D91 279 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 TSSK4Q6SA08 328 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 TFAP2DQ7Z6R9 452 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 CPNE8Q86YQ8 564 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 RFFLQ8WZ73 363 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 ALG14Q96F25 216 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 NCAPGQ9BPX3 1015 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 SNRNP25Q9BV90 132 aaKnown RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 CIPCQ9C0C6 399 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 ZYG11BQ9C0D3 744 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 KIAA1522Q9P206 1035 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 THAP10Q9P2Z0 257 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 USP18Q9UMW8 372 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 AP4E1Q9UPM8 1137 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 REXO2Q9Y3B8 237 aaKnown RBP12.34□□□□□ -0.43
SSBP3-214ENST00000533209 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 PCDHA13Q9Y5I0 950 aa12.34□□□□□ -0.43
SSBP3-214ENST00000533209 GOLGA6L6A8MZA4 724 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 WASH3PC4AMC7 463 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 H0Y858 1186 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 PROSCO94903 275 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 SP9P0CG40 484 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 POLR2EP19388 210 aaKnown RBP12.33□□□□□ -0.44
SSBP3-214ENST00000533209 NTSR1P30989 418 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 CSKP41240 450 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 WASP42768 502 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 PLK1P53350 603 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 OXCT1P55809 520 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 GSDMDP57764 484 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 SLC12A1Q13621 1099 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 ENPP2Q13822 863 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 ZNF234Q14588 700 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 SPA17Q15506 151 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 CRY1Q16526 586 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 PTPRNQ16849 979 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 EOGTQ5NDL2 527 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 TXNRD3NBQ6F5E7 133 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 RWDD4Q6NW29 188 aaKnown RBP12.33□□□□□ -0.44
SSBP3-214ENST00000533209 TMEM92Q6UXU6 159 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 TRMT11Q7Z4G4 463 aaKnown RBP12.33□□□□□ -0.44
SSBP3-214ENST00000533209 SETD3Q86TU7 594 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-214ENST00000533209 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 CHPFQ8IZ52 775 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 APCDD1Q8J025 514 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 CYB5D2Q8WUJ1 264 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 UCMAQ8WVF2 138 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 TBC1D31Q96DN5 1066 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 KCTD15Q96SI1 283 aaPredicted RBP12.33□□□□□ -0.44
SSBP3-214ENST00000533209 GABRG3Q99928 467 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 CACNA2D2Q9NY47 1150 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 SLC8A2Q9UPR5 921 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 OR51B4Q9Y5P0 310 aa12.33□□□□□ -0.44
SSBP3-214ENST00000533209 RCCD1A6NED2 376 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 NPC1O15118 1278 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 CREB3O43889 395 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 RHOCP08134 193 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 DLDP09622 509 aaKnown RBP12.32□□□□□ -0.44
SSBP3-214ENST00000533209 RHOQP17081 205 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 HOXA6P31267 233 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 CTSOP43234 321 aaPredicted RBP12.32□□□□□ -0.44
SSBP3-214ENST00000533209 PTPN5P54829 565 aa12.32□□□□□ -0.44
SSBP3-214ENST00000533209 SLC25A11Q02978 314 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms