RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FAM124AQ86V42 546 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 PPM1KQ8N3J5 372 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CXorf38Q8TB03 319 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 TTC9Q92623 222 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 SKA1Q96BD8 255 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 KREMEN1Q96MU8 473 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 ZNF578Q96N58 590 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CHP1Q99653 195 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 C6orf106Q9H6K1 298 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CPNE5Q9HCH3 593 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 AIPL1Q9NZN9 384 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 THAP10Q9P2Z0 257 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 NXF1Q9UBU9 619 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CHORDC1Q9UHD1 332 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 LSM7Q9UK45 103 aaKnown RBP11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CLCA2Q9UQC9 943 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 ZKSCAN5Q9Y2L8 839 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 SLCO1B1Q9Y6L6 691 aa11.8□□□□□ -0.52
TRAPPC4-213ENST00000533149 CABIN1Q9Y6J0 2220 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 YKT6O15498 198 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 ASS1P00966 412 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 ACO1P21399 889 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 ABCB4P21439 1286 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 GLDCP23378 1020 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 SOX5P35711 763 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 CDK17Q00537 523 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 GCNT1Q02742 428 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 ARID5AQ03989 594 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 MDH1BQ5I0G3 518 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 SNRNP27Q8WVK2 155 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 TAF4BQ92750 862 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 HPDLQ96IR7 371 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 FAM81BQ96LP2 452 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 ACE2Q9BYF1 805 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 IMPG2Q9BZV3 1241 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 XYLT2Q9H1B5 865 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 CCSER2Q9H7U1 834 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 SLC27A6Q9Y2P4 619 aa11.79□□□□□ -0.52
TRAPPC4-213ENST00000533149 SOWAHDA6NJG2 315 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 F8VZ95 297 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 VILLO15195 856 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 TSPAN3O60637 253 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 GFPT2O94808 682 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 CLSTN1O94985 981 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 SERPING1P05155 500 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 FERP16591 822 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 ATICP31939 592 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 GNL1P36915 607 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 EIF4A3P38919 411 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 COPAP53621 1224 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 BCAT1P54687 386 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 VAC14Q08AM6 782 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 ZNF699Q32M78 642 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 KCNT1Q5JUK3 1230 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 COLEC12Q5KU26 742 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 RAD9BQ6WBX8 426 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 ENOSF1Q7L5Y1 443 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 ZSCAN30Q86W11 494 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 GATAD2AQ86YP4 633 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 LSMEM2Q8N112 164 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 RFFLQ8WZ73 363 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 SHC3Q92529 594 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 TMEM131Q92545 1883 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 TSC1Q92574 1164 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 WBP2Q969T9 261 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 BIRC7Q96CA5 298 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 NAF1Q96HR8 494 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 MMS19Q96T76 1030 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 ELF4Q99607 663 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 FAM117AQ9C073 453 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 SNX25Q9H3E2 840 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 COMMD8Q9NX08 183 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 ARHGAP20Q9P2F6 1191 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 FBXO10Q9UK96 956 aa11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 HEMK1Q9Y5R4 338 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-213ENST00000533149 CBX4O00257 560 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 GREM1O60565 184 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 FSBPO95073 299 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 SEMA4FO95754 770 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 PLEKP08567 350 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 TBXAS1P24557 533 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 ACSL1P33121 698 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 USP8P40818 1118 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 CACNA2D1P54289 1103 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 RACK1P63244 317 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 KLHL30Q0D2K2 578 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 CUL2Q13617 745 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 ZNF667Q5HYK9 610 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 HGSNATQ68CP4 663 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 LAYNQ6UX15 382 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 CACUL1Q86Y37 369 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 FAM71AQ8IYT1 594 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 EID2Q8N6I1 236 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 DCBLD1Q8N8Z6 715 aa11.77□□□□□ -0.53
TRAPPC4-213ENST00000533149 KIAA1524Q8TCG1 905 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms