RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TKTL2Q9H0I9 626 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 FBRSQ9HAH7 460 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 PRSS16Q9NQE7 514 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 WSB2Q9NYS7 404 aaPredicted RBP31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 PILRBQ9UKJ0 227 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 VANGL2Q9ULK5 521 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 PAXBP1Q9Y5B6 917 aa31.26■■■□□ 2.59
SSSCA1-207ENST00000533115 GON4LQ3T8J9 2241 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 SLC12A1Q13621 1099 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 KLHL40Q2TBA0 621 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 STPG1Q5TH74 334 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 PEAR1Q5VY43 1037 aaPredicted RBP31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 TRNP1Q6NT89 227 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 CACUL1Q86Y37 369 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 SLC41A1Q8IVJ1 513 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 APCDD1Q8J025 514 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 KDM1BQ8NB78 822 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 SLC30A5Q8TAD4 765 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 TOE1Q96GM8 510 aaKnown RBP31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 PCDHB18PQ96TA0 734 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 EDEM2Q9BV94 578 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 SIK2Q9H0K1 926 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 RTN4Q9NQC3 1192 aaKnown RBP31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 EVLQ9UI08 416 aaPredicted RBP31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 ERVW-1Q9UQF0 538 aa31.25■■■□□ 2.59
SSSCA1-207ENST00000533115 ATXN2Q99700 1313 aaKnown RBP31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 LNP1A1A4G5 178 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 TEX33O43247 280 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 C7P10643 843 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 UNGP13051 313 aaPredicted RBP31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 OXTRP30559 389 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 HOXD12P35452 270 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 GGCXP38435 758 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 CENPCQ03188 943 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 C14orf80Q86SX3 495 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 ZNF419Q96HQ0 510 aaPredicted RBP31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 HSPA12BQ96MM6 686 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 ANLNQ9NQW6 1124 aa31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 METTL5Q9NRN9 209 aaKnown RBP31.24■■■□□ 2.59
SSSCA1-207ENST00000533115 IGLV3-19P01714 112 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 SRPRAP08240 638 aaKnown RBP31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 CTSOP43234 321 aaPredicted RBP31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 OXCT1P55809 520 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 IRX4P78413 519 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 ECT2LQ008S8 904 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 C5orf22Q49AR2 442 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 TRIM61Q5EBN2 209 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 IL31Q6EBC2 164 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 CFAP57Q96MR6 1250 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 C11orf70Q9BRQ4 267 aa31.23■■■□□ 2.59
SSSCA1-207ENST00000533115 I6L893 689 aaPredicted RBP31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 PDGFRAP16234 1089 aa31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 IRAK1P51617 712 aa31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 HNRNPA1L2Q32P51 320 aaKnown RBP31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 CXorf57Q6NSI4 855 aaKnown RBP31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 BNIPLQ7Z465 357 aa31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 FOXJ1Q92949 421 aa31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 MTG2Q9H4K7 406 aa31.22■■■□□ 2.59
SSSCA1-207ENST00000533115 MZF1P28698 734 aaPredicted RBP31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 NSFP46459 744 aaKnown RBP31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 PLK1P53350 603 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 RPS14P62263 151 aaKnown RBP31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 ARID5BQ14865 1188 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 IQCB1Q15051 598 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 CLEC16AQ2KHT3 1053 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 FILIP1LQ4L180 1135 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 RNF219Q5W0B1 726 aaPredicted RBP31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 PHLDB2Q86SQ0 1253 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 EMC1Q8N766 993 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 CEP76Q8TAP6 659 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 NUP58Q9BVL2 599 aa31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 NUSAP1Q9BXS6 441 aaKnown RBP31.21■■■□□ 2.59
SSSCA1-207ENST00000533115 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 SYCE3A1L190 88 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 CLDN11O75508 207 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 RDXP35241 583 aaKnown RBP31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 ZBTB16Q05516 673 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 PTP4A2Q12974 167 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 ZNF177Q13360 481 aaPredicted RBP31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 SYCP2LQ5T4T6 812 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 ACBD5Q5T8D3 534 aaPredicted RBP31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 SLC23A3Q6PIS1 610 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 C1orf74Q96LT6 269 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 AGPAT1Q99943 283 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 GPR174Q9BXC1 333 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 ADAM22Q9P0K1 906 aa31.2■■■□□ 2.59
SSSCA1-207ENST00000533115 TTC34A8MYJ7 566 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 SIN3BO75182 1162 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 CCDC172P0C7W6 258 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 FERP16591 822 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 CDH4P55283 916 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 SULT2A1Q06520 285 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 DUOXA1Q1HG43 343 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 ZNF776Q68DI1 518 aaPredicted RBP31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 RABEPKQ7Z6M1 372 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 PHF13Q86YI8 300 aaPredicted RBP31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 CADM4Q8NFZ8 388 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 PPP1R9BQ96SB3 815 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 TMPRSS4Q9NRS4 437 aa31.19■■■□□ 2.58
SSSCA1-207ENST00000533115 SEPT11Q9NVA2 429 aaKnown RBP31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms