RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ODF2Q5BJF6 829 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 DGKKQ5KSL6 1271 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 MANEALQ5VSG8 457 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 LRRC38Q5VT99 294 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 RNF43Q68DV7 783 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 NAIF1Q69YI7 327 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TXNRD3NBQ6F5E7 133 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 FSTL4Q6MZW2 842 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 POLNQ7Z5Q5 900 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 BMP8AQ7Z5Y6 402 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 CIR1Q86X95 450 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 CPNE8Q86YQ8 564 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TERB1Q8NA31 727 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 KCTD15Q96SI1 283 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 FOXQ1Q9C009 403 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 LMAN1LQ9HAT1 526 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 LZTFL1Q9NQ48 299 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 ABCB8Q9NUT2 735 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 TBC1D30Q9Y2I9 924 aa11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 MTF2Q9Y483 593 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC4-211ENST00000533012 HELZP42694 1942 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 DLL1O00548 723 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 FGF10O15520 208 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 PALMO75781 387 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 EGFP01133 1207 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 CHRNB1P11230 501 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 PABPC1P11940 636 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 HLA-FP30511 346 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 IRAK1P51617 712 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 CDH6P55285 790 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 SEMA3BQ13214 749 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 SLC12A1Q13621 1099 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 DMC1Q14565 340 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 PDK2Q15119 407 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 E2F5Q15329 346 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 GEN1Q17RS7 908 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 ATP13A4Q4VNC1 1196 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 FSCBQ5H9T9 825 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 ANKS1BQ7Z6G8 1248 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 TFAP2DQ7Z6R9 452 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 SETD3Q86TU7 594 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 AHI1Q8N157 1196 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 PHTF2Q8N3S3 785 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 SYNPOQ8N3V7 929 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 PJA1Q8NG27 643 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 WFIKKN2Q8TEU8 576 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 UBE2Q2Q8WVN8 375 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 GOLPH3Q9H4A6 298 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 PCDH18Q9HCL0 1135 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 TMEM248Q9NWD8 314 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 DDX56Q9NY93 547 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 CWC15Q9P013 229 aaKnown RBP11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 GGA2Q9UJY4 613 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 AMFRQ9UKV5 643 aa11.56□□□□□ -0.56
TRAPPC4-211ENST00000533012 ILVBLA1L0T0 632 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 GRID2IPA4D2P6 1211 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 WASH4PA8MWX3 477 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 PRRT4C9JH25 899 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 K7EQS6 105 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 PSTPIP1O43586 416 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 PDGFBP01127 241 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 ATP5BP06576 529 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 RHOCP08134 193 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 GOT1P17174 413 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 POLR2EP19388 210 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 HOXC13P31276 330 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 CD70P32970 193 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 MAPKAPK2P49137 400 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 MESP2Q0VG99 397 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 LMAN2Q12907 356 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 CCINQ13939 588 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 ARTNQ5T4W7 220 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 RNF219Q5W0B1 726 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 CXorf57Q6NSI4 855 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZNF783Q6ZMS7 281 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 RFX8Q6ZV50 586 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 PEX26Q7Z412 305 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 KIAA0907Q7Z7F0 614 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 NLRP14Q86W24 1093 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZNF687Q8N1G0 1237 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 RTL3Q8N8U3 475 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 LRRC57Q8N9N7 239 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 FAM71BQ8TC56 605 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 WFDC5Q8TCV5 224 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 UCMAQ8WVF2 138 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 ALS2CR12Q96Q35 445 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 C1QTNF1Q9BXJ1 281 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 CALN1Q9BXU9 219 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 MAK16Q9BXY0 300 aaKnown RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 MUC3BQ9H195 1237 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 ELOVL2Q9NXB9 296 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 RCOR3Q9P2K3 495 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 DNAI1Q9UI46 699 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 PLA2G4CQ9UP65 541 aa11.55□□□□□ -0.56
TRAPPC4-211ENST00000533012 STARD13Q9Y3M8 1113 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms