RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 C15orf59Q2T9L4 293 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-210ENST00000532935 PLEKHG6Q3KR16 790 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 CCDC14Q49A88 953 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 C5orf22Q49AR2 442 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 KIAA1324Q6UXG2 1013 aaKnown RBP15.85■□□□□ 0.13
CPSF1-210ENST00000532935 ZNF366Q8N895 744 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 C3orf20Q8ND61 904 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 MKRN2Q9H000 416 aaKnown RBP15.85■□□□□ 0.13
CPSF1-210ENST00000532935 HAUS4Q9H6D7 363 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 TMPRSS4Q9NRS4 437 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 SEMA4GQ9NTN9 838 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 IFNKQ9P0W0 207 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 PCDHGA5Q9Y5G8 931 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 SNX10Q9Y5X0 201 aa15.85■□□□□ 0.13
CPSF1-210ENST00000532935 TCRBV5S1A1TA0A578 114 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 ZNF217O75362 1048 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 CLDN11O75508 207 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 RFC1P35251 1148 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-210ENST00000532935 COPAP53621 1224 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 KLHL30Q0D2K2 578 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 CAMK2GQ13555 558 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-210ENST00000532935 SLC12A1Q13621 1099 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 GSE1Q14687 1217 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 CSRP2Q16527 193 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 CDO1Q16878 200 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 RAB6CQ53S08 254 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 ACBD5Q5T8D3 534 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-210ENST00000532935 CXorf57Q6NSI4 855 aaKnown RBP15.84■□□□□ 0.13
CPSF1-210ENST00000532935 PPP1R2P3Q6NXS1 205 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 DNAJC24Q6P3W2 148 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 LPCAT2Q7L5N7 544 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 ZNF571Q7Z3V5 609 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-210ENST00000532935 FAM131BQ86XD5 332 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 TMPRSS6Q8IU80 811 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 ZNF683Q8IZ20 524 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 MCOLN2Q8IZK6 566 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 APCDD1Q8J025 514 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 MYO19Q96H55 970 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 C1orf74Q96LT6 269 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 HAPLN3Q96S86 360 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 RAB6CQ9H0N0 254 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 TSPY26PQ9H489 355 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 PRDM16Q9HAZ2 1276 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 TAS2R14Q9NYV8 317 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 CYP8B1Q9UNU6 501 aa15.84■□□□□ 0.13
CPSF1-210ENST00000532935 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-210ENST00000532935 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 IGHV1OR15-9A0A0B4J2B8 117 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 A0A1W2PQJ5 194 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 SIGLEC16A6NMB1 481 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CNTN5O94779 1100 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 GPD1P21695 349 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 MZF1P28698 734 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-210ENST00000532935 MPLP40238 635 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CTSOP43234 321 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-210ENST00000532935 DHPSP49366 369 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-210ENST00000532935 PLK1P53350 603 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CDH4P55283 916 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 OXCT1P55809 520 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 ST8SIA6P61647 398 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 ECT2LQ008S8 904 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CREB5Q02930 508 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 ZNF177Q13360 481 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CCDC6Q16204 474 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 PLA2G2CQ5R387 149 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 SH3PXD2AQ5TCZ1 1133 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 WDR59Q6PJI9 974 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 LRSAM1Q6UWE0 723 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 LRRC31Q6UY01 552 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 SLC36A4Q6YBV0 504 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 STRADAQ7RTN6 431 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 METTL3Q86U44 580 aaKnown RBP15.83■□□□□ 0.12
CPSF1-210ENST00000532935 TMEFF1Q8IYR6 380 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 OR2T3Q8NH03 318 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CENPIQ92674 756 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-210ENST00000532935 SIPA1Q96FS4 1042 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 MRGPRX3Q96LB0 322 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CD93Q9NPY3 652 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 SUN2Q9UH99 717 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 ERVW-1Q9UQF0 538 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 CHD5Q8TDI0 1954 aa15.83■□□□□ 0.12
CPSF1-210ENST00000532935 BCLAF3A2AJT9 711 aaKnown RBP15.82■□□□□ 0.12
CPSF1-210ENST00000532935 DRGXA6NNA5 263 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 TMCO5BA8MYB1 307 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 E9PAM4 449 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 SRPRAP08240 638 aaKnown RBP15.82■□□□□ 0.12
CPSF1-210ENST00000532935 SKILP12757 684 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 RRM1P23921 792 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 NUMBP49757 651 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 RPL6Q02878 288 aaKnown RBP15.82■□□□□ 0.12
CPSF1-210ENST00000532935 LMNB2Q03252 620 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 ALFQ53S48 1182 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 SPDYCQ5MJ68 293 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 PPP1R15BQ5SWA1 713 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 PRR23CQ6ZRP0 262 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 KDM1BQ8NB78 822 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 FAM172AQ8WUF8 416 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 PRCCQ92733 491 aaPredicted RBP15.82■□□□□ 0.12
CPSF1-210ENST00000532935 IQCDQ96DY2 449 aa15.82■□□□□ 0.12
CPSF1-210ENST00000532935 VCPIP1Q96JH7 1222 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms