RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 LRRC53A6NM62 1247 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 AP5Z1O43299 807 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 KRT3P12035 628 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 TNFAIP3P21580 790 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 SDHBP21912 280 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 COPAP53621 1224 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 CCDC6Q16204 474 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 PLEKHG6Q3KR16 790 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 MON1BQ7L1V2 547 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 CYP2U1Q7Z449 544 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 C14orf80Q86SX3 495 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 TMEFF1Q8IYR6 380 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 KDM1BQ8NB78 822 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 OR2T3Q8NH03 318 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 RXFP2Q8WXD0 754 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 FBRSQ9HAH7 460 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 ANLNQ9NQW6 1124 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 AIPL1Q9NZN9 384 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 ERVW-1Q9UQF0 538 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 CEP250Q9BV73 2442 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 DCHS1Q96JQ0 3298 aa23.69■■□□□ 1.38
CAPN1-222ENST00000532285 LAMA1P25391 3075 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 C2CD4BA6NLJ0 364 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 I6L893 689 aaPredicted RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 CLDN11O75508 207 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 SRPRAP08240 638 aaKnown RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 SDC4P31431 198 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ATXN1P54253 815 aaKnown RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 UBASH3AP57075 661 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ATP11AP98196 1134 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ECT2LQ008S8 904 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 RPL6Q02878 288 aaKnown RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ZNF177Q13360 481 aaPredicted RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ASIC2Q16515 512 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 FIGNQ5HY92 759 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 SFMBT2Q5VUG0 894 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ACAD10Q6JQN1 1059 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 PPP1R2P3Q6NXS1 205 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 LRRC31Q6UY01 552 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 APCDD1Q8J025 514 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ZNF366Q8N895 744 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 C12orf50Q8NA57 414 aaPredicted RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 C3orf20Q8ND61 904 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 RMDN1Q96DB5 314 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 MYO19Q96H55 970 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 HAPLN3Q96S86 360 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 SYT11Q9BT88 431 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 SELENOOQ9BVL4 669 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 TTYH3Q9C0H2 523 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 ITM2CQ9NQX7 267 aa23.68■■□□□ 1.38
CAPN1-222ENST00000532285 USP36Q9P275 1121 aaKnown RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 NYNRINQ9P2P1 1898 aaKnown RBP23.68■■□□□ 1.38
CAPN1-222ENST00000532285 SIGLEC16A6NMB1 481 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 ACADMP11310 421 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 GGCXP38435 758 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 PTPN9P43378 593 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 PLK1P53350 603 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 CDH4P55283 916 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 SULT2A1Q06520 285 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 RSPO4Q2I0M5 234 aaPredicted RBP23.67■■□□□ 1.38
CAPN1-222ENST00000532285 CCDC14Q49A88 953 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 CXorf57Q6NSI4 855 aaKnown RBP23.67■■□□□ 1.38
CAPN1-222ENST00000532285 FAM131BQ86XD5 332 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 JOSD2Q8TAC2 188 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 MRGPRX3Q96LB0 322 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 NUP58Q9BVL2 599 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 PRSS16Q9NQE7 514 aa23.67■■□□□ 1.38
CAPN1-222ENST00000532285 NDUFS2O75306 463 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 GJB6O95452 261 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 C7P10643 843 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 OXTRP30559 389 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 RFC1P35251 1148 aaPredicted RBP23.66■■□□□ 1.38
CAPN1-222ENST00000532285 DPP6P42658 865 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 IRAK1P51617 712 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 ARID5BQ14865 1188 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 SF3A2Q15428 464 aaKnown RBP23.66■■□□□ 1.38
CAPN1-222ENST00000532285 CDO1Q16878 200 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 C15orf59Q2T9L4 293 aaPredicted RBP23.66■■□□□ 1.38
CAPN1-222ENST00000532285 RNF219Q5W0B1 726 aaPredicted RBP23.66■■□□□ 1.38
CAPN1-222ENST00000532285 STRADAQ7RTN6 431 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 ZNF683Q8IZ20 524 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 TMPRSS4Q9NRS4 437 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 CDV3Q9UKY7 258 aaKnown RBP23.66■■□□□ 1.38
CAPN1-222ENST00000532285 TBC1D30Q9Y2I9 924 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 PI4KAP42356 2102 aa23.66■■□□□ 1.38
CAPN1-222ENST00000532285 DRGXA6NNA5 263 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 MZF1P28698 734 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-222ENST00000532285 CD6P30203 668 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 PRKCIP41743 596 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 PTGER3P43115 390 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 CTSOP43234 321 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-222ENST00000532285 TPMTP51580 245 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 PUM1Q14671 1186 aaKnown RBP eCLIP23.65■■□□□ 1.38
CAPN1-222ENST00000532285 HNRNPA1L2Q32P51 320 aaKnown RBP23.65■■□□□ 1.38
CAPN1-222ENST00000532285 AASDHQ4L235 1098 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-222ENST00000532285 LYSMD4Q5XG99 296 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 DNAJC24Q6P3W2 148 aa23.65■■□□□ 1.38
CAPN1-222ENST00000532285 WDR59Q6PJI9 974 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms