RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CYBBP04839 570 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 BMP1P13497 986 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 PTPN7P35236 360 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 RPS6KA1Q15418 735 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 PPP2R5EQ16537 467 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 TAZQ16635 292 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 MPPE1Q53F39 396 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 KCNT1Q5JUK3 1230 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 ZNF569Q5MCW4 686 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 ARTNQ5T4W7 220 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 RAP1GAP2Q684P5 730 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 TXNRD3NBQ6F5E7 133 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 FBXL22Q6P050 247 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 CHST9Q7L1S5 443 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 CPNE8Q86YQ8 564 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 RCOR2Q8IZ40 523 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 CYP4X1Q8N118 509 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 HJURPQ8NCD3 748 aaPredicted RBP12.9□□□□□ -0.34
COPB1-208ENST00000532088 DNASE1L2Q92874 299 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 IRF7Q92985 503 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 FAF2Q96CS3 445 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 TBC1D31Q96DN5 1066 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 MSANTD3Q96H12 275 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 KXD1Q9BQD3 176 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 SPHK2Q9NRA0 654 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 NEU3Q9UQ49 428 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 EFR3BQ9Y2G0 817 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 HYOU1Q9Y4L1 999 aa12.9□□□□□ -0.34
COPB1-208ENST00000532088 A0A1B0GVM2 712 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 TCAF2A6NFQ2 919 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 LRIG2O94898 1065 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 ZRANB2O95218 330 aaKnown RBP eCLIP12.89□□□□□ -0.35
COPB1-208ENST00000532088 KDELR1P24390 212 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 SLC6A4P31645 630 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 ARL4AP40617 200 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 CETN2P41208 172 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 CDH6P55285 790 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 GNG11P61952 73 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 ETF1P62495 437 aaKnown RBP12.89□□□□□ -0.35
COPB1-208ENST00000532088 PFKPQ01813 784 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 GAD2Q05329 585 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 TDGQ13569 410 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 KRT81Q14533 505 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 DHCR24Q15392 516 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 CA9Q16790 459 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 SMTNL2Q2TAL5 461 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 SLC35F6Q8N357 371 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 SLC44A3Q8N4M1 653 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 CPA6Q8N4T0 437 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 KCTD6Q8NC69 237 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 HSPH1Q92598 858 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 KRT35Q92764 455 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 TMA16Q96EY4 203 aaKnown RBP12.89□□□□□ -0.35
COPB1-208ENST00000532088 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 KCTD15Q96SI1 283 aaPredicted RBP12.89□□□□□ -0.35
COPB1-208ENST00000532088 TLR10Q9BXR5 811 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 ZYG11BQ9C0D3 744 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 SIK2Q9H0K1 926 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 CARD9Q9H257 536 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 CATSPERBQ9H7T0 1116 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 PCDH18Q9HCL0 1135 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 SLC2A4RGQ9NR83 387 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 TMPRSS4Q9NRS4 437 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 WNT6Q9Y6F9 365 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 XIRP2A4UGR9 3374 aa12.89□□□□□ -0.35
COPB1-208ENST00000532088 GOLGA6L7A0A1B0GV03 622 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 C3orf70A6NLC5 250 aaPredicted RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 CES2O00748 559 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 CLDN11O75508 207 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 KRT1P04264 644 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 CYP17A1P05093 508 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 GLULP15104 373 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 PRLRP16471 622 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 RHOQP17081 205 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 SP100P23497 879 aaPredicted RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 GDI1P31150 447 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 CDH4P55283 916 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 OXCT1P55809 520 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 TPI1P60174 286 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 AMPD2Q01433 879 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 RUNX3Q13761 415 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 DPYSQ14117 519 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 DPYSL3Q14195 570 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 ATP13A4Q4VNC1 1196 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 FYB2Q5VWT5 728 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 VASH1Q7L8A9 365 aaPredicted RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 LGI2Q8N0V4 545 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 PRICKLE1Q96MT3 831 aaPredicted RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 RPP25Q9BUL9 199 aaKnown RBP12.88□□□□□ -0.35
COPB1-208ENST00000532088 SLC2A11Q9BYW1 496 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 LINC00597Q9H2U6 94 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 BRD9Q9H8M2 597 aa12.88□□□□□ -0.35
COPB1-208ENST00000532088 ECT2Q9H8V3 914 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms