RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ZNF333Q96JL9 665 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 RILPQ96NA2 401 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 RBBP8Q99708 897 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 MED10Q9BTT4 135 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 CEP41Q9BYV8 373 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 CRTAC1Q9NQ79 661 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 DNAJC28Q9NX36 388 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 BFARQ9NZS9 450 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 KLHL8Q9P2G9 620 aaPredicted RBP17.26■□□□□ 0.35
VPS26B-206ENST00000531741 DNAJC16Q9Y2G8 782 aa17.26■□□□□ 0.35
VPS26B-206ENST00000531741 SYNJ2BP-COX16A0A087WUM0 186 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 NRP1O14786 923 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 NVLO15381 856 aaKnown RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ITM2AO43736 263 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 KRT36O76013 467 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 KLHL2O95198 593 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ZNF865P0CJ78 1059 aaPredicted RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ERVK-10P10266 1014 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 MX2P20592 715 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 TYK2P29597 1187 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 SPRP35270 261 aaPredicted RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ABL2P42684 1182 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 HARS2P49590 506 aaKnown RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 CPT1AP50416 773 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 LIMK2P53671 638 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 MAP3K7CLP57077 242 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 TPI1P60174 286 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 MORN1Q5T089 497 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 BSPRYQ5W0U4 402 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 SCUBE1Q8IWY4 988 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 SLC7A14Q8TBB6 771 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 PPP4R1Q8TF05 950 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 VAT1Q99536 393 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 EBF4Q9BQW3 602 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 KATNAL1Q9BW62 490 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ULBP1Q9BZM6 244 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 GBA3Q9H227 469 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 PIH1D1Q9NWS0 290 aaKnown RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 COX16Q9P0S2 106 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ZNF212Q9UDV6 495 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 VANGL2Q9ULK5 521 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 TRIP12Q14669 1992 aaPredicted RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 COL4A4P53420 1690 aaPredicted RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 MAGEB16A2A368 324 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 PRR5-ARHGAP8B1AHC4 643 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 FAM72CH0Y354 149 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 CAPN9O14815 690 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 SMNDC1O75940 238 aaKnown RBP eCLIP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 F9P00740 461 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 SERPINB8P50452 374 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ALDH18A1P54886 795 aaKnown RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ARHGAP8P85298 464 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ARL13BQ3SXY8 428 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 FAM72AQ5TYM5 149 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 OLFML2BQ68BL8 750 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 FAM72DQ6L9T8 149 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 FAM72BQ86X60 149 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 FCRL3Q96P31 734 aaPredicted RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 SORT1Q99523 831 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 NMRK1Q9NWW6 199 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 DDX43Q9NXZ2 648 aaKnown RBP17.25■□□□□ 0.35
VPS26B-206ENST00000531741 Q9Y3F1 56 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 PTCH2Q9Y6C5 1203 aa17.25■□□□□ 0.35
VPS26B-206ENST00000531741 ZCWPW2A0A1B0GU75 182 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 C17orf102A2RUQ5 167 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 YJEFN3A6XGL0 299 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 KCNK1O00180 336 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 GNAT1P11488 350 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 CYP2B6P20813 491 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 KCNA4P22459 653 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 MLH1P40692 756 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 CPA2P48052 419 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 FKBP1BP68106 108 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 IRX4P78413 519 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 GALNT2Q10471 571 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 PRAMEF19Q5SWL8 479 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 SNX30Q5VWJ9 437 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 ITPRIPL1Q6GPH6 555 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 FAM35AQ86V20 835 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 C10orf107Q8IVU9 208 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 TP53INP2Q8IXH6 220 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 LMNTD2Q8IXW0 634 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 NETO2Q8NC67 525 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 OR52K1Q8NGK4 314 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 PPP1R13LQ8WUF5 828 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 SENP8Q96LD8 212 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 SMOQ99835 787 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 SYT15Q9BQS2 421 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 TSPYL2Q9H2G4 693 aaPredicted RBP17.24■□□□□ 0.35
VPS26B-206ENST00000531741 SPON1Q9HCB6 807 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 SNX15Q9NRS6 342 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 TMEM216Q9P0N5 145 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 DNAJB4Q9UDY4 337 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 CORO1CQ9ULV4 474 aaPredicted RBP17.24■□□□□ 0.35
VPS26B-206ENST00000531741 APOBEC2Q9Y235 224 aaKnown RBP17.24■□□□□ 0.35
VPS26B-206ENST00000531741 IQCA1LA6NCM1 817 aa17.24■□□□□ 0.35
VPS26B-206ENST00000531741 I6L893 689 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms