RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 PBX1P40424 430 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 STAT1P42224 750 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 GSTM5P46439 218 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 ARF3P61204 181 aaPredicted RBP4.85□□□□□ -1.63
USP47-211ENST00000531513 ARF1P84077 181 aaKnown RBP4.85□□□□□ -1.63
USP47-211ENST00000531513 MTAPQ13126 283 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 FHL1Q13642 323 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 BMPR2Q13873 1038 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 TBCCQ15814 346 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 FAM133BQ5BKY9 247 aaKnown RBP4.85□□□□□ -1.63
USP47-211ENST00000531513 CBWD5Q5RIA9 395 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 SLC2A7Q6PXP3 512 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 TECPR1Q7Z6L1 1165 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 KRT77Q7Z794 578 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 OR4N4Q8N0Y3 316 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 GALNT4Q8N4A0 578 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 ANKRD44Q8N8A2 993 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 FAM71DQ8N9W8 422 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 OSCP1Q8WVF1 389 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 OVCA2Q8WZ82 227 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 REXO5Q96IC2 774 aaKnown RBP4.85□□□□□ -1.63
USP47-211ENST00000531513 WACQ9BTA9 647 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 VN1R3Q9BXE9 311 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 PDCL3Q9H2J4 239 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 PLEKHA2Q9HB19 425 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 STEAP1Q9UHE8 339 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 CNOT7Q9UIV1 285 aaKnown RBP4.85□□□□□ -1.63
USP47-211ENST00000531513 SERTAD3Q9UJW9 196 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 PCDHB7Q9Y5E2 793 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 SNX14Q9Y5W7 946 aa4.85□□□□□ -1.63
USP47-211ENST00000531513 RSF1Q96T23 1441 aaPredicted RBP4.85□□□□□ -1.63
USP47-211ENST00000531513 FER1L4A9Z1Z3 1794 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 SMIM22K7EJ46 135 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 ZNF213O14771 459 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 PTP4A3O75365 173 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 JTBO76095 146 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 NTN1O95631 604 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 TOP3BO95985 862 aaKnown RBP4.84□□□□□ -1.63
USP47-211ENST00000531513 F9P00740 461 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 CD19P15391 556 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 NDUFB7P17568 137 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 ALOX12P18054 663 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 SFPQP23246 707 aaKnown RBP eCLIP4.84□□□□□ -1.63
USP47-211ENST00000531513 PAFAH1B1P43034 410 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 RBM6P78332 1123 aaKnown RBP4.84□□□□□ -1.63
USP47-211ENST00000531513 RPP30P78346 268 aaKnown RBP4.84□□□□□ -1.63
USP47-211ENST00000531513 CAMK1Q14012 370 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 SEC23BQ15437 767 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 LY6KQ17RY6 165 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 DEPDC1Q5TB30 811 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 PRAMEF17Q5VTA0 474 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 LIPMQ5VYY2 423 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 CCDC144NLQ6NUI1 221 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 H1FNTQ75WM6 255 aaPredicted RBP4.84□□□□□ -1.63
USP47-211ENST00000531513 DTX2Q86UW9 622 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 IZUMO1Q8IYV9 350 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 METTL25Q8N6Q8 603 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 LINS1Q8NG48 757 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 RBM17Q96I25 401 aaKnown RBP4.84□□□□□ -1.63
USP47-211ENST00000531513 PPP1R10Q96QC0 940 aaKnown RBP4.84□□□□□ -1.63
USP47-211ENST00000531513 EIF3CQ99613 913 aaKnown RBP4.84□□□□□ -1.63
USP47-211ENST00000531513 KRTAP2-2Q9BYT5 123 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 TAOK3Q9H2K8 898 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 IL21RQ9HBE5 538 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 TRIM36Q9NQ86 728 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 ARHGEF3Q9NR81 526 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 RXFP3Q9NSD7 469 aa4.84□□□□□ -1.63
USP47-211ENST00000531513 KAT6AQ92794 2004 aa4.84□□□□□ -1.64
USP47-211ENST00000531513 RUSC2Q8N2Y8 1516 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 H3BNC9 293 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 M0QYT0 321 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 PPEF2O14830 753 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 PPM1DO15297 605 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 HNRNPRO43390 633 aaKnown RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 AHCYL1O43865 530 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 GUCY1B2O75343 617 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 NXPH3O95157 252 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 PDHA1P08559 390 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 HSPA1AP0DMV8 641 aaKnown RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 HSPA1BP0DMV9 641 aaKnown RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 DRD1P21728 446 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 THBS4P35443 961 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 HOXD13P35453 343 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 KRT20P35900 424 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 RGS19P49795 217 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 MTHFSP49914 203 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 SEMA3BQ13214 749 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 EIF4A2Q14240 407 aaKnown RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 GPR162Q16538 588 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 NFIL3Q16649 462 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 AAK1Q2M2I8 961 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 PRICKLE4Q2TBC4 344 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 LRRC24Q50LG9 513 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 FAM69AQ5T7M9 428 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 SNX30Q5VWJ9 437 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 CRELD2Q6UXH1 353 aaPredicted RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 SYNE3Q6ZMZ3 975 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 ENOSF1Q7L5Y1 443 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms