RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 POLGP54098 1239 aaPredicted RBP7.58□□□□□ -1.2
SVIP-204ENST00000530199 FAM189BP81408 668 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 APBA1Q02410 837 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 SLC24A5Q71RS6 500 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 LONP2Q86WA8 852 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 LRRC43Q8N309 656 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 RABGGTAQ92696 567 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 FAM84AQ96KN4 292 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 TAAR1Q96RJ0 339 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 SELENOOQ9BVL4 669 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 C1orf43Q9BWL3 253 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 UNKQ9C0B0 810 aaKnown RBP7.58□□□□□ -1.2
SVIP-204ENST00000530199 C11orf54Q9H0W9 315 aaPredicted RBP7.58□□□□□ -1.2
SVIP-204ENST00000530199 RGS18Q9NS28 235 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 TMEM161AQ9NX61 479 aa7.58□□□□□ -1.2
SVIP-204ENST00000530199 ZNF215Q9UL58 517 aaPredicted RBP7.58□□□□□ -1.2
SVIP-204ENST00000530199 MRPS17Q9Y2R5 130 aaKnown RBP7.58□□□□□ -1.2
SVIP-204ENST00000530199 CCDC171Q6TFL3 1326 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 KDM3AQ9Y4C1 1321 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 SHISA7A6NL88 538 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 F5H423 210 aaPredicted RBP7.57□□□□□ -1.2
SVIP-204ENST00000530199 AHSGP02765 367 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 UBA1P22314 1058 aaKnown RBP7.57□□□□□ -1.2
SVIP-204ENST00000530199 ADD2P35612 726 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 PBX3P40426 434 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 GZMKP49863 264 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 SUMO3P55854 103 aaPredicted RBP7.57□□□□□ -1.2
SVIP-204ENST00000530199 SP2Q02086 613 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 SRSF5Q13243 272 aaKnown RBP7.57□□□□□ -1.2
SVIP-204ENST00000530199 RNF151Q2KHN1 245 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 ZNF385BQ569K4 471 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 EMC10Q5UCC4 262 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 ZNF852Q6ZMS4 543 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 ADGRE4PQ86SQ3 457 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 ZNF761Q86XN6 746 aaPredicted RBP7.57□□□□□ -1.2
SVIP-204ENST00000530199 VPS52Q8N1B4 723 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 ZNF843Q8N446 348 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 DNAJB3Q8WWF6 145 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 CFHR4Q92496 578 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 FGF14Q92915 247 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 CASD1Q96PB1 797 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 RMDN3Q96TC7 470 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 RPP25Q9BUL9 199 aaKnown RBP7.57□□□□□ -1.2
SVIP-204ENST00000530199 MLXIPQ9HAP2 919 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 VPS45Q9NRW7 570 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 COL20A1Q9P218 1284 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 CPNE7Q9UBL6 633 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 PADI4Q9UM07 663 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 TRPV2Q9Y5S1 764 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 SLC4A4Q9Y6R1 1079 aa7.57□□□□□ -1.2
SVIP-204ENST00000530199 MYH15Q9Y2K3 1946 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 ACACAQ13085 2346 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 CCDC195A0A1B0GUA6 201 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 C4orf47A7E2U8 309 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 H0Y626 953 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 TRIM16O95361 564 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 TSPY3P0CV98 308 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 TSPY8P0CW00 308 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 RAP2AP10114 183 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 HOXA6P31267 233 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 STT3AP46977 705 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 CXCL12P48061 93 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 PIK3CGP48736 1102 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 NOVP48745 357 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 ARFIP2P53365 341 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 CREMQ03060 361 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 SCAPQ12770 1279 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 ALDH1L2Q3SY69 923 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 PABPC1LQ4VXU2 614 aaKnown RBP7.56□□□□□ -1.2
SVIP-204ENST00000530199 INO80DQ53TQ3 878 aaPredicted RBP7.56□□□□□ -1.2
SVIP-204ENST00000530199 FAM209BQ5JX69 171 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 DGKKQ5KSL6 1271 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 IZUMO3Q5VZ72 239 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 KBTBD2Q8IY47 623 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 IL17RDQ8NFM7 739 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 KBTBD7Q8WVZ9 684 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 TNPO1Q92973 898 aaKnown RBP7.56□□□□□ -1.2
SVIP-204ENST00000530199 ZC3H10Q96K80 434 aaKnown RBP7.56□□□□□ -1.2
SVIP-204ENST00000530199 EDEM2Q9BV94 578 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 TRIM54Q9BYV2 358 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 ARFGAP3Q9NP61 516 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 PNPLA8Q9NP80 782 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 GPRC5BQ9NZH0 403 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 SLC23A1Q9UHI7 598 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 TUBE1Q9UJT0 475 aa7.56□□□□□ -1.2
SVIP-204ENST00000530199 COL12A1Q99715 3063 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 PMS2P1A4D2B8 440 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 POM121BA6NF01 834 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 F8W8V4 182 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 IL18RAPO95256 599 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 MATN4O95460 622 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 SBK3P0C264 359 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 TSHRP16473 764 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 HDCP19113 662 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 CA8P35219 290 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 SLC16A2P36021 539 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 AFF3P51826 1226 aaKnown RBP7.55□□□□□ -1.2
SVIP-204ENST00000530199 NPEPPSP55786 919 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 SOX8P57073 446 aa7.55□□□□□ -1.2
SVIP-204ENST00000530199 PTH1RQ03431 593 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms