RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	OR14C36	Q8NHC7	312 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	ADAM32	Q8TC27	787 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	ERCC4	Q92889	916 aa	Predicted RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	KAT5	Q92993	513 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	SLC35C1	Q96A29	364 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	CRELD1	Q96HD1	420 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	CNDP2	Q96KP4	475 aa	Known RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	RPL10L	Q96L21	214 aa	Known RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	FCRL2	Q96LA5	508 aa	Predicted RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	HSFY1	Q96LI6	401 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	PRICKLE1	Q96MT3	831 aa	Predicted RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	NT5C1B	Q96P26	610 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	BBC3	Q96PG8	261 aa	Predicted RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	FAM129B	Q96TA1	746 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	ELF4	Q99607	663 aa	Predicted RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	NUCKS1	Q9H1E3	243 aa	Known RBP	11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	TMEM131	Q92545	1883 aa		11.78	□□□□□ -0.52
PTP4A2-211	ENST00000528840	TBC1D3D	A0A087WVF3	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3I	A0A087WXS9	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3E	A0A087X179	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3K	A0A087X1G2	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3L	B9A6J9	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	FBXO21	O94952	628 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	MOCS3	O95396	460 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	MOCS2	O96007	188 aa	Predicted RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SRPRA	P08240	638 aa	Known RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3H	P0C7X1	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	GOT1	P17174	413 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	PSMD8	P48556	350 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	ECT2L	Q008S8	904 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	BNIP3	Q12983	259 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	DNAJC3	Q13217	504 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SHB	Q15464	509 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	RNF219	Q5W0B1	726 aa	Predicted RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3G	Q6DHY5	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3C	Q6IPX1	549 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TBC1D3	Q8IZP1	549 aa	Predicted RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	APCDD1	Q8J025	514 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	LGI2	Q8N0V4	545 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	DQX1	Q8TE96	717 aa	Known RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SAP25	Q8TEE9	199 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SERAC1	Q96JX3	654 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	METTL14	Q9HCE5	456 aa	Known RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	ST7	Q9NRC1	585 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	XPO7	Q9UIA9	1087 aa	Known RBP	11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TLR6	Q9Y2C9	796 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	ATP6V1D	Q9Y5K8	247 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	ATRX	P46100	2492 aa		11.77	□□□□□ -0.53
PTP4A2-211	ENST00000528840	BAHCC1	Q9P281	2608 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	KNL1	Q8NG31	2342 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	PKD1L2	Q7Z442	2459 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840		A0A087WV48	116 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	EDDM13	A0A1B0GTR0	161 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TLR4	O00206	839 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	CAPN9	O14815	690 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	PAPSS1	O43252	624 aa	Predicted RBP	11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	LUC7L3	O95232	432 aa	Known RBP	11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SMC2	O95347	1197 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	IL1B	P01584	269 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	C5AR1	P21730	350 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	NNMT	P40261	264 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	CCR5	P51681	352 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SEMG2	Q02383	582 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	1e-6	■■■■□ 26.3
PTP4A2-211	ENST00000528840	ARID5B	Q14865	1188 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	STIL	Q15468	1287 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SYPL2	Q5VXT5	272 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	RAP1GAP2	Q684P5	730 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	AADAT	Q8N5Z0	425 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	KDM1B	Q8NB78	822 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	PTPRN2	Q92932	1015 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SMARCE1	Q969G3	411 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	FAM149B1	Q96BN6	582 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SLC39A13	Q96H72	371 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	GSDMA	Q96QA5	445 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	GDF3	Q9NR23	364 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	ADAMTS1	Q9UHI8	967 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	FZD4	Q9ULV1	537 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	PCDHGA1	Q9Y5H4	931 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	AK5	Q9Y6K8	562 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	CABIN1	Q9Y6J0	2220 aa		11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840	URB1	O60287	2271 aa	Known RBP	11.76	□□□□□ -0.53
PTP4A2-211	ENST00000528840		A0A1W2PR77	199 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840		E9PAM4	449 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	C1S	P09871	688 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	VAV1	P15498	845 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	TACR2	P21452	398 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	ITPKB	P27987	946 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	STK19	P49842	368 aa	Predicted RBP	11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	LRRC63	Q05C16	580 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	CETN1	Q12798	172 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	CCDC40	Q4G0X9	1142 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	COBLL1	Q53SF7	1204 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	SLC45A4	Q5BKX6	768 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	C6orf118	Q5T5N4	469 aa		11.75	□□□□□ -0.53
PTP4A2-211	ENST00000528840	DENND1B	Q6P3S1	775 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms