RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 GABRG2P18507 467 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 ZNF143P52747 638 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-215ENST00000528396 CDH4P55283 916 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 SULT2A1Q06520 285 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 FSCBQ5H9T9 825 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 KIAA1211LQ6NV74 962 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 C14orf80Q86SX3 495 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 KBTBD6Q86V97 674 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 C1orf74Q96LT6 269 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 SYT11Q9BT88 431 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 TRIM5Q9C035 493 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 MUC3BQ9H195 1237 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 PRDM16Q9HAZ2 1276 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
CAPN1-215ENST00000528396 CNOT8Q9UFF9 292 aaKnown RBP13.79□□□□□ -0.2
CAPN1-215ENST00000528396 VPS28Q9UK41 221 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 SNX10Q9Y5X0 201 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 CACNA1AO00555 2505 aa13.79□□□□□ -0.2
CAPN1-215ENST00000528396 SDK1Q7Z5N4 2213 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 DMDP11532 3685 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 E9PAM4 449 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 DDX3XO00571 662 aaKnown RBP eCLIP13.78□□□□□ -0.23e-11■■■■■ 33.2
CAPN1-215ENST00000528396 DCLK1O15075 740 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 ATMINO43313 823 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-215ENST00000528396 ZNF217O75362 1048 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 ENDOD1O94919 500 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 RETP07949 1114 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 RHOCP08134 193 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 ACADMP11310 421 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 HLA-EP13747 358 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 NDUFV2P19404 249 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 PRKCHP24723 683 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 PSMA2P25787 234 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 ADRA1BP35368 520 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 ECT2LQ008S8 904 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 MAMLD1Q13495 774 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 PLEKHG6Q3KR16 790 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 EFHC2Q5JST6 749 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 SH3PXD2AQ5TCZ1 1133 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 RWDD4Q6NW29 188 aaKnown RBP13.78□□□□□ -0.2
CAPN1-215ENST00000528396 TFAP2DQ7Z6R9 452 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 KIAA0907Q7Z7F0 614 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-215ENST00000528396 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-215ENST00000528396 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-215ENST00000528396 TTC17Q96AE7 1141 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 TMPRSS4Q9NRS4 437 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 MYO1AQ9UBC5 1043 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 SUN2Q9UH99 717 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 SLC25A13Q9UJS0 675 aa13.78□□□□□ -0.2
CAPN1-215ENST00000528396 CCP110O43303 1012 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
CAPN1-215ENST00000528396 RNF8O76064 485 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 SRPRAP08240 638 aaKnown RBP13.77□□□□□ -0.21
CAPN1-215ENST00000528396 OR1E1P30953 314 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 HDAC4P56524 1084 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 RPL7AP62424 266 aaKnown RBP13.77□□□□□ -0.21
CAPN1-215ENST00000528396 ENPP2Q13822 863 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 HGSNATQ68CP4 663 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 LPCAT2Q7L5N7 544 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 TMC6Q7Z403 805 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 BNIPLQ7Z465 357 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 SLFN11Q7Z7L1 901 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 CACUL1Q86Y37 369 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
CAPN1-215ENST00000528396 ZNF366Q8N895 744 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 OR8K1Q8NGG5 319 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 RLN3Q8WXF3 142 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 SIPA1Q96FS4 1042 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 LOXL4Q96JB6 756 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 ZYG11BQ9C0D3 744 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 FBRSQ9HAH7 460 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 ANLNQ9NQW6 1124 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 MPP6Q9NZW5 540 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 OR12D3Q9UGF7 316 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 USP18Q9UMW8 372 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 CYP8B1Q9UNU6 501 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 ERVW-1Q9UQF0 538 aa13.77□□□□□ -0.21
CAPN1-215ENST00000528396 NDUFS2O75306 463 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 CNTN5O94779 1100 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 PLEKP08567 350 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-215ENST00000528396 MZF1P28698 734 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-215ENST00000528396 P2RY2P41231 377 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 DHPSP49366 369 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-215ENST00000528396 NUMBP49757 651 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 IRAK1P51617 712 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 KRT83P78385 493 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 PTPRNQ16849 979 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 PLK5Q496M5 336 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 C5orf22Q49AR2 442 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 CCDC122Q5T0U0 273 aa13.76□□□□□ -0.21
CAPN1-215ENST00000528396 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms