RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 RASAL2Q9UJF2 1139 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 CTNND2Q9UQB3 1225 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 PCDHB4Q9Y5E5 795 aa10.95□□□□□ -0.66
CPSF1-203ENST00000527916 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.95□□□□□ -0.66
CPSF1-203ENST00000527916 C6P13671 934 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 GLDCP23378 1020 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 CORO1AP31146 461 aaKnown RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 STX17P56962 302 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 EFEMP1Q12805 493 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 SFSWAPQ12872 951 aaKnown RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 FNDC3BQ53EP0 1204 aaKnown RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 BSPRYQ5W0U4 402 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 EID2Q8N6I1 236 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 MLKLQ8NB16 471 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 UBA3Q8TBC4 463 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 SAP25Q8TEE9 199 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 DDI1Q8WTU0 396 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 SORCS1Q8WY21 1168 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 PLD4Q96BZ4 506 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 FAM81BQ96LP2 452 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 IPO9Q96P70 1041 aaKnown RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 IRX2Q9BZI1 471 aaPredicted RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 GDF3Q9NR23 364 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 STOML2Q9UJZ1 356 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 AGO1Q9UL18 857 aaKnown RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 CLCA2Q9UQC9 943 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 NCKAP1Q9Y2A7 1128 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 HBS1LQ9Y450 684 aaKnown RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 ARID1BQ8NFD5 2236 aaPredicted RBP10.94□□□□□ -0.66
CPSF1-203ENST00000527916 BOD1L1Q8NFC6 3051 aa10.94□□□□□ -0.66
CPSF1-203ENST00000527916 SLC12A8A0AV02 714 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 YJEFN3A6XGL0 299 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 E7ENQ6 273 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 CBX4O00257 560 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 GABBR2O75899 941 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 WISP1O95388 367 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 LATS1O95835 1130 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 C7P10643 843 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
CPSF1-203ENST00000527916 PCBP4P57723 403 aaKnown RBP10.93□□□□□ -0.66
CPSF1-203ENST00000527916 DAOAP59103 153 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 ZNF445P59923 1031 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 ADIGQ0VDE8 80 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 MEA1Q16626 185 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 PRAMEF14Q5SWL7 426 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 KIAA0895LQ68EN5 471 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 PMF1Q6P1K2 205 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 ENOSF1Q7L5Y1 443 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 ERICH1Q86X53 443 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 FMNL3Q8IVF7 1028 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 ARHGEF19Q8IW93 802 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 SIX6OS1Q8N1H7 587 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 GANCQ8TET4 914 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 RNF139Q8WU17 664 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 TSC1Q92574 1164 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 KAT5Q92993 513 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 ZNF578Q96N58 590 aaPredicted RBP10.93□□□□□ -0.66
CPSF1-203ENST00000527916 ZSWIM1Q9BR11 485 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 SCML1Q9UN30 329 aa10.93□□□□□ -0.66
CPSF1-203ENST00000527916 TP53BP1Q12888 1972 aaPredicted RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 A0A1W2PPC4 97 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 GTPBP10A4D1E9 387 aaKnown RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 FAM47DPA6NHR8 397 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 SLC28A2O43868 658 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 FBXO21O94952 628 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 IGHV4-34P06331 123 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 HMBSP08397 361 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 PRKCSHP14314 528 aaPredicted RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 CKMT2P17540 419 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 HARS2P49590 506 aaKnown RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 RPS14P62263 151 aaKnown RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 E2F1Q01094 437 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 CAMK4Q16566 473 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 SLC45A4Q5BKX6 768 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 ARHGAP40Q5TG30 622 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 ZNF776Q68DI1 518 aaPredicted RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 MSANTD2Q6P1R3 559 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 USP30Q70CQ3 517 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 BEND5Q7L4P6 421 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 DENND1CQ8IV53 801 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 LSMEM2Q8N112 164 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 OXR1Q8N573 874 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 DCBLD1Q8N8Z6 715 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 RBBP8NLQ8NC74 664 aaPredicted RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 WFIKKN2Q8TEU8 576 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 STK32AQ8WU08 396 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 RFFLQ8WZ73 363 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 NDRG1Q92597 394 aaKnown RBP10.92□□□□□ -0.66
CPSF1-203ENST00000527916 AZIN2Q96A70 460 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 P2RY11Q96G91 374 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 KREMEN1Q96MU8 473 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 SLC6A18Q96N87 628 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 MED15Q96RN5 788 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 ORAI3Q9BRQ5 295 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 TMEM245Q9H330 911 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 AASDHPPTQ9NRN7 309 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 SUN2Q9UH99 717 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 ADAMTS1Q9UHI8 967 aa10.92□□□□□ -0.66
CPSF1-203ENST00000527916 AHCTF1Q8WYP5 2266 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms