RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 C1orf74Q96LT6 269 aa27.19■■□□□ 1.94
TSPAN4-217ENST00000527644 EDEM3Q9BZQ6 932 aa27.19■■□□□ 1.94
TSPAN4-217ENST00000527644 FBRSQ9HAH7 460 aa27.19■■□□□ 1.94
TSPAN4-217ENST00000527644 ANLNQ9NQW6 1124 aa27.19■■□□□ 1.94
TSPAN4-217ENST00000527644 ITM2CQ9NQX7 267 aa27.19■■□□□ 1.94
TSPAN4-217ENST00000527644 GOLGA6L19H0YKK7 550 aa27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 PDGFRAP16234 1089 aa27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 ATXN1P54253 815 aaKnown RBP27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 FANCCQ00597 558 aa27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 RPL6Q02878 288 aaKnown RBP27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 CYP2U1Q7Z449 544 aa27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 C14orf80Q86SX3 495 aa27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 C12orf50Q8NA57 414 aaPredicted RBP27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 RXFP2Q8WXD0 754 aa27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 PPP1R9BQ96SB3 815 aa27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 USP36Q9P275 1121 aaKnown RBP27.18■■□□□ 1.94
TSPAN4-217ENST00000527644 MUC22E2RYF6 1773 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 LRRC53A6NM62 1247 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 I6L893 689 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 CLDN11O75508 207 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 SRPRAP08240 638 aaKnown RBP27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 KRT3P12035 628 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 SDC4P31431 198 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 GGCXP38435 758 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 PLK1P53350 603 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 C1QBPQ07021 282 aaKnown RBP27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 ZNF177Q13360 481 aaPredicted RBP27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 SF3A2Q15428 464 aaKnown RBP27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 APCDD1Q8J025 514 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 ZNF366Q8N895 744 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 MYO19Q96H55 970 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 MRGPRX3Q96LB0 322 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 HAPLN3Q96S86 360 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 DLL3Q9NYJ7 618 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 ERVW-1Q9UQF0 538 aa27.17■■□□□ 1.94
TSPAN4-217ENST00000527644 C2CD4BA6NLJ0 364 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 C7P10643 843 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 TNFAIP3P21580 790 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 PTGER3P43115 390 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 CDH4P55283 916 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 ATP11AP98196 1134 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 ECT2LQ008S8 904 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 PUM1Q14671 1186 aaKnown RBP eCLIP27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 CCDC14Q49A88 953 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 ACAD10Q6JQN1 1059 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 CXorf57Q6NSI4 855 aaKnown RBP27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 LRRC31Q6UY01 552 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 MON1BQ7L1V2 547 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 C3orf20Q8ND61 904 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 JOSD2Q8TAC2 188 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 SYT11Q9BT88 431 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 SELENOOQ9BVL4 669 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 PRSS16Q9NQE7 514 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 AIPL1Q9NZN9 384 aa27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 CDV3Q9UKY7 258 aaKnown RBP27.16■■□□□ 1.94
TSPAN4-217ENST00000527644 ACADMP11310 421 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 CD6P30203 668 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 DPP6P42658 865 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 PTPN9P43378 593 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 UBASH3AP57075 661 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 SULT2A1Q06520 285 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 ARID5BQ14865 1188 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 ASIC2Q16515 512 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 AASDHQ4L235 1098 aaPredicted RBP27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 FIGNQ5HY92 759 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 SFMBT2Q5VUG0 894 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 LYSMD4Q5XG99 296 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 PPP1R2P3Q6NXS1 205 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 FAM131BQ86XD5 332 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 ZNF683Q8IZ20 524 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 NETO1Q8TDF5 533 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 PIGKQ92643 395 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 TTYH3Q9C0H2 523 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 SMOC1Q9H4F8 434 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 CD93Q9NPY3 652 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 NUP205Q92621 2012 aa27.15■■□□□ 1.94
TSPAN4-217ENST00000527644 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 SIGLEC16A6NMB1 481 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 DRGXA6NNA5 263 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 NDUFS2O75306 463 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 GJB6O95452 261 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 MZF1P28698 734 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 OXTRP30559 389 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 CTSOP43234 321 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 TPMTP51580 245 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 IRAK1P51617 712 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 C15orf59Q2T9L4 293 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 RNF219Q5W0B1 726 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 ARMCX6Q7L4S7 300 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 STRADAQ7RTN6 431 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 NUP58Q9BVL2 599 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 TMPRSS4Q9NRS4 437 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 TBC1D30Q9Y2I9 924 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 SNX10Q9Y5X0 201 aa27.14■■□□□ 1.94
TSPAN4-217ENST00000527644 IGLV3-19P01714 112 aa27.13■■□□□ 1.93
TSPAN4-217ENST00000527644 RFC1P35251 1148 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-217ENST00000527644 ZBTB16Q05516 673 aa27.13■■□□□ 1.93
TSPAN4-217ENST00000527644 CDO1Q16878 200 aa27.13■■□□□ 1.93
TSPAN4-217ENST00000527644 HNRNPA1L2Q32P51 320 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms