RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 DDX50Q9BQ39 737 aaKnown RBP21.06■□□□□ 0.96
SMCO4-203ENST00000526869 LMAN2LQ9H0V9 348 aa21.06■□□□□ 0.96
SMCO4-203ENST00000526869 RAB6BQ9NRW1 208 aa21.06■□□□□ 0.96
SMCO4-203ENST00000526869 DPP7Q9UHL4 492 aa21.06■□□□□ 0.96
SMCO4-203ENST00000526869 F5H5T6 163 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 CLASP2O75122 1294 aaKnown RBP21.05■□□□□ 0.96
SMCO4-203ENST00000526869 NUDT17P0C025 328 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 GABRR2P28476 465 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 MAPKAPK2P49137 400 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 BASP1P80723 227 aaKnown RBP21.05■□□□□ 0.96
SMCO4-203ENST00000526869 WASHC5Q12768 1159 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 GPM6BQ13491 265 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 ANKRD20A2Q5SQ80 823 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 ANKRD20A1Q5TYW2 823 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 ANKRD20A3Q5VUR7 823 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 ELMSAN1Q6PJG2 1045 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 CCDC25Q86WR0 208 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 CCDC13Q8IYE1 715 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 CCDC110Q8TBZ0 833 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 SLC22A17Q8WUG5 538 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 FATE1Q969F0 183 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 EXOC4Q96A65 974 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 ZIM3Q96PE6 472 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 RUFY1Q96T51 708 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 RNF38Q9H0F5 515 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 ASAH2Q9NR71 780 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 TRHDEQ9UKU6 1024 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 DOCK4Q8N1I0 1966 aa21.05■□□□□ 0.96
SMCO4-203ENST00000526869 DENND4CQ5VZ89 1909 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 SOBPA7XYQ1 873 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 OPA1O60313 960 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 MBL2P11226 248 aaPredicted RBP21.04■□□□□ 0.96
SMCO4-203ENST00000526869 TPSB2P20231 275 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 CCNCP24863 283 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 IRS1P35568 1242 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 NRLP54845 237 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 EIF3BP55884 814 aaKnown RBP21.04■□□□□ 0.96
SMCO4-203ENST00000526869 ARL4CP56559 192 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 CDK16Q00536 496 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 SEMA5AQ13591 1074 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 TPSAB1Q15661 275 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 RAB30Q15771 203 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 CENPUQ71F23 418 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 GAREM2Q75VX8 874 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 SPRED2Q7Z698 418 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 TP53INP2Q8IXH6 220 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 KRT222Q8N1A0 295 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 ATPAF2Q8N5M1 289 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 CCDC33Q8N5R6 958 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 LEMD2Q8NC56 503 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 ZFRQ96KR1 1074 aaKnown RBP21.04■□□□□ 0.96
SMCO4-203ENST00000526869 RBM15Q96T37 977 aaKnown RBP eCLIP21.04■□□□□ 0.96
SMCO4-203ENST00000526869 SH3GL2Q99962 352 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 EPB41L4BQ9H329 900 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 MPP6Q9NZW5 540 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 IGSF9Q9P2J2 1179 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 ZNF212Q9UDV6 495 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 STOML2Q9UJZ1 356 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 PLAAQ9Y263 795 aa21.04■□□□□ 0.96
SMCO4-203ENST00000526869 YBX2Q9Y2T7 364 aaKnown RBP21.04■□□□□ 0.96
SMCO4-203ENST00000526869 E7ESA3 106 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 AGPSO00116 658 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 RIPK2O43353 540 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 TMEM63AO94886 807 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 DDX6P26196 483 aaKnown RBP eCLIP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 CORO1AP31146 461 aaKnown RBP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 SLC7A9P82251 487 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 HIF1AQ16665 826 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 PARP6Q2NL67 630 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 FAM133BQ5BKY9 247 aaKnown RBP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 RABGAP1LQ5R372 815 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 ANKRD22Q5VYY1 191 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 DENND2CQ68D51 928 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 TIGD7Q6NT04 549 aaPredicted RBP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 MCUQ8NE86 351 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 IGSF8Q969P0 613 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 CELF6Q96J87 481 aaKnown RBP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 TTC25Q96NG3 672 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 RPRD1AQ96P16 312 aaPredicted RBP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 SLC39A8Q9C0K1 460 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 CDC42EP4Q9H3Q1 356 aaKnown RBP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 SEMA4AQ9H3S1 761 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 MAN1C1Q9NR34 630 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 EIF2B3Q9NR50 452 aaKnown RBP21.03■□□□□ 0.96
SMCO4-203ENST00000526869 ZDHHC7Q9NXF8 308 aa21.03■□□□□ 0.96
SMCO4-203ENST00000526869 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.02■□□□□ 0.96
SMCO4-203ENST00000526869 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.02■□□□□ 0.96
SMCO4-203ENST00000526869 CCDC85CA6NKD9 419 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 H0YGN5 161 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 CCL16O15467 120 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 METTL18O95568 372 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 HDCP19113 662 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 PTPN3P26045 913 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 YBEYP58557 167 aaPredicted RBP21.02■□□□□ 0.96
SMCO4-203ENST00000526869 IFI35P80217 286 aaPredicted RBP21.02■□□□□ 0.96
SMCO4-203ENST00000526869 PARP15Q460N3 678 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 HSP90B2PQ58FF3 399 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 ADGRF1Q5T601 910 aa21.02■□□□□ 0.96
SMCO4-203ENST00000526869 TTC39BQ5VTQ0 682 aaPredicted RBP21.02■□□□□ 0.96
SMCO4-203ENST00000526869 HS6ST3Q8IZP7 471 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms