RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 TLR10Q9BXR5 811 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 ARHGEF4Q9NR80 690 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 DNAJC17Q9NVM6 304 aaKnown RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 PPARGC1AQ9UBK2 798 aaKnown RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 DNAI1Q9UI46 699 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 PIAS3Q9Y6X2 628 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 BDP1A6H8Y1 2624 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 MUC22E2RYF6 1773 aaPredicted RBP14.11□□□□□ -0.15
CD44-224ENST00000526669 KCNK3O14649 394 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 ZRANB2O95218 330 aaKnown RBP eCLIP14.11□□□□□ -0.15
CD44-224ENST00000526669 PYGMP11217 842 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 KRT10P13645 584 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 RHOQP17081 205 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 ERCC2P18074 760 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 IL4RP24394 825 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 OPRD1P41143 372 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 CDH4P55283 916 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 DYNLT1P63172 113 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 MESP2Q0VG99 397 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 CDH18Q13634 790 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 CKAP5Q14008 2032 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 ANKRD20A8PQ5CZ79 823 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 FSCBQ5H9T9 825 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 ACBD5Q5T8D3 534 aaPredicted RBP14.11□□□□□ -0.15
CD44-224ENST00000526669 TTC39BQ5VTQ0 682 aaPredicted RBP14.11□□□□□ -0.15
CD44-224ENST00000526669 TXNDC11Q6PKC3 985 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 CHST9Q7L1S5 443 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 NLRP14Q86W24 1093 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 MAP7D3Q8IWC1 876 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 OR52K2Q8NGK3 314 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 EXD1Q8NHP7 514 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 PCDH19Q8TAB3 1148 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 RBM41Q96IZ5 413 aaKnown RBP14.11□□□□□ -0.15
CD44-224ENST00000526669 XPO6Q96QU8 1125 aaKnown RBP14.11□□□□□ -0.15
CD44-224ENST00000526669 ZNF670Q9BS34 389 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 CATSPERBQ9H7T0 1116 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 SLC2A4RGQ9NR83 387 aa14.11□□□□□ -0.15
CD44-224ENST00000526669 hCG_1818297A0A087WSY0 165 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.1□□□□□ -0.15
CD44-224ENST00000526669 SPECC1L-ADORA2AF8WAN1 911 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 DCLK1O15075 740 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 FGF10O15520 208 aaPredicted RBP14.1□□□□□ -0.15
CD44-224ENST00000526669 CACNG3O60359 315 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 TULP3O75386 442 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 CLDN11O75508 207 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 MAP3K6O95382 1288 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 RHOCP08134 193 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 MSNP26038 577 aaKnown RBP14.1□□□□□ -0.15
CD44-224ENST00000526669 CXCR5P32302 372 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 CTHP32929 405 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 CD70P32970 193 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 CDKN2BP42772 138 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 PFKPQ01813 784 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 LMAN2Q12907 356 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 ZNF177Q13360 481 aaPredicted RBP14.1□□□□□ -0.15
CD44-224ENST00000526669 PON2Q15165 354 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 SLC44A4Q53GD3 710 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 SEL1L2Q5TEA6 688 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 SYT10Q6XYQ8 523 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 TPRG1Q6ZUI0 275 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 ZSCAN30Q86W11 494 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 CCDC117Q8IWD4 279 aaPredicted RBP14.1□□□□□ -0.15
CD44-224ENST00000526669 TP53INP2Q8IXH6 220 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 ETFBKMTQ8IXQ9 262 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 RCOR2Q8IZ40 523 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 CCDC33Q8N5R6 958 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 PQLC3Q8N755 202 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 RTL3Q8N8U3 475 aaKnown RBP14.1□□□□□ -0.15
CD44-224ENST00000526669 CELF6Q96J87 481 aaKnown RBP14.1□□□□□ -0.15
CD44-224ENST00000526669 RNF157Q96PX1 679 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 HERPUD2Q9BSE4 406 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 HEMGNQ9BXL5 484 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 ABCB8Q9NUT2 735 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 TMEM248Q9NWD8 314 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 ZNF212Q9UDV6 495 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 FBXL21Q9UKT6 434 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 JRKLQ9Y4A0 524 aa14.1□□□□□ -0.15
CD44-224ENST00000526669 FANCGO15287 622 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 MFSD11O43934 449 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 CD72P21854 359 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 MZF1P28698 734 aaPredicted RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 OR1E1P30953 314 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 HTR7P34969 479 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 CSKP41240 450 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 DGKGP49619 791 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 ZNF135P52742 658 aaPredicted RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 ADCY2Q08462 1091 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 MLF2Q15773 248 aaPredicted RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 RNF219Q5W0B1 726 aaPredicted RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 RNF43Q68DV7 783 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 NCBP2-AS2Q69YL0 99 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 GRAMD4Q6IC98 578 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 CXorf57Q6NSI4 855 aaKnown RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 C1orf228Q6PIY5 440 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 NPNTQ6UXI9 565 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 SFTPA1Q8IWL2 248 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 NPWQ8N729 165 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 OR7D4Q8NG98 312 aa14.09□□□□□ -0.15
CD44-224ENST00000526669 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.09□□□□□ -0.15
CD44-224ENST00000526669 HAUS1Q96CS2 278 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms