RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TDRD12Q587J7 1177 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 C10orf76Q5T2E6 689 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 KRT27Q7Z3Y8 459 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 KDELC2Q7Z4H8 507 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 FAM217AQ8IXS0 508 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 PAQR4Q8N4S7 273 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 TMED6Q8WW62 240 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 HES6Q96HZ4 224 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 WDR77Q9BQA1 342 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 CATSPERBQ9H7T0 1116 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 SDF2L1Q9HCN8 221 aa3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 TYW1Q9NV66 732 aaKnown RBP3.07□□□□□ -1.92
ECHDC1-219ENST00000526299 A0A1B0GVY2 172 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 KRT36O76013 467 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 NEURL1O76050 574 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 SERPINB2P05120 415 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 U2AF1L5P0DN76 240 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 ZNF12P17014 697 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 ZP1P60852 638 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 SHC2P98077 582 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 U2AF1Q01081 240 aaKnown RBP eCLIP3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 GALNT3Q14435 633 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 ALG10Q5BKT4 473 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 ALG10BQ5I7T1 473 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 CEP85LQ5SZL2 805 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 WBP2NLQ6ICG8 309 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 FJX1Q86VR8 437 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 CAMK1DQ8IU85 385 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 IP6K1Q92551 441 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 GRAMD1AQ96CP6 724 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 IQCDQ96DY2 449 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 SFXN1Q9H9B4 322 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 FBXO28Q9NVF7 368 aa3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 ZMYND8Q9ULU4 1186 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-219ENST00000526299 WDR81Q562E7 1941 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 AREL1O15033 823 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 SLC16A5O15375 505 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 MSI1O43347 362 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 LCKP06239 509 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 ITGB8P26012 769 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 PEX2P28328 305 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 SLC16A2P36021 539 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 RBM39Q14498 530 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 RAP1GAP2Q684P5 730 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 CXorf57Q6NSI4 855 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 DSTYKQ6XUX3 929 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 Q6ZSV7 163 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 CCDC28AQ8IWP9 274 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 SLC25A41Q8N5S1 370 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 CCDC150Q8NCX0 1101 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 OR14A16Q8NHC5 309 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 ADAD1Q96M93 576 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 DDX31Q9H8H2 851 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 PNRC2Q9NPJ4 139 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 DDX20Q9UHI6 824 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 NOP58Q9Y2X3 529 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 SNX13Q9Y5W8 968 aa3.05□□□□□ -1.92
ECHDC1-219ENST00000526299 MS4A18H0YCH9 400 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 STMND1H3BQB6 276 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 VWA5AO00534 786 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 BUB3O43684 328 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 SNRNP70P08621 437 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 F7P08709 466 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 SRGAP2BP0DMP2 458 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 CHRNB2P17787 502 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 TNFSF8P32971 234 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 NSUN2Q08J23 767 aaKnown RBP eCLIP3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 GRSF1Q12849 480 aaKnown RBP eCLIP3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 ATP1A4Q13733 1029 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 ZRSR1Q15695 479 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 MRNIPQ6NTE8 343 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 WDR93Q6P2C0 686 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 KIAA0408Q6ZU52 694 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 SPEM1Q8N4L4 309 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 EPYCQ99645 322 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 BRINP2Q9C0B6 783 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 B3GNT4Q9C0J1 378 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 OSBPL5Q9H0X9 879 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 PCDHAC1Q9H158 963 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 ZNF304Q9HCX3 659 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 OCIAD1Q9NX40 245 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 DONSONQ9NYP3 566 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 FBXO4Q9UKT5 387 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 PCDHB7Q9Y5E2 793 aa3.04□□□□□ -1.92
ECHDC1-219ENST00000526299 NPC1O15118 1278 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 PDGFRBP09619 1106 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 ALDOCP09972 364 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 RPL17P18621 184 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 MST1P26927 711 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 EPHB1P54762 984 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 FAM193AP78312 1265 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 TRAF3Q13114 568 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 HLFQ16534 295 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 DUSP6Q16828 381 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 ARHGAP15Q53QZ3 475 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 EXD3Q8N9H8 876 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 ATP11CQ8NB49 1132 aa3.03□□□□□ -1.92
ECHDC1-219ENST00000526299 KDM1BQ8NB78 822 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms