RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 GIMAP4Q9NUV9 329 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 INTS10Q9NVR2 710 aaKnown RBP3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 EHD2Q9NZN4 543 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 SELENONQ9NZV5 590 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 KCND2Q9NZV8 630 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 JKAMPQ9P055 326 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 CPSF2Q9P2I0 782 aaKnown RBP3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF70Q9UC06 446 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLCO3A1Q9UIG8 710 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 CDC42EP3Q9UKI2 254 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 BAG5Q9UL15 447 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 NAP1L2Q9ULW6 460 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 SUFUQ9UMX1 484 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 ATP11BQ9Y2G3 1177 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 RRP15Q9Y3B9 282 aaKnown RBP3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 SH3BP1Q9Y3L3 701 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 KCNE2Q9Y6J6 123 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 ATRNL1Q5VV63 1379 aa3.24□□□□□ -1.89
TRAPPC4-207ENST00000526141 GOLGA6L10A0A0M3HER8 536 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 A0A0U1RQK1 487 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 A0A1W2PRX2 142 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF320A2RRD8 509 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 CCDC151A5D8V7 595 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF785A8K8V0 405 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 A8MV72 311 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 KRTAP29-1A8MX34 341 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 KIF28PB7ZC32 967 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 MPHOSPH10O00566 681 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 BCAT2O15382 392 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 TGFB1I1O43294 461 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 STX6O43752 255 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 EXOC3O60645 756 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 TAF5LO75529 589 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ALDH1A2O94788 518 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PDE8BO95263 885 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 GUCA1CO95843 209 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SNRNP70P08621 437 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 CYP21A2P08686 494 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 WEE2P0C1S8 567 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 EEF2P13639 858 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 GYPEP15421 78 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 LAG3P18627 525 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 TLX1P31314 330 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PTPN7P35236 360 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ALDH1A3P47895 512 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 LIMK1P53667 647 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 EIF3BP55884 814 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PSMC6P62333 389 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PRAMEP78395 509 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 TCF15Q12870 199 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SF3A3Q12874 501 aaKnown RBP eCLIP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLC14A1Q13336 389 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 RIN1Q13671 783 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 CSHL1Q14406 222 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SEMA3AQ14563 771 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 KCNAB1Q14722 419 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PTPAQ15257 358 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 MED22Q15528 200 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF750Q32MQ0 723 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PLA1AQ53H76 456 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF766Q5HY98 468 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 C9orf152Q5JTZ5 239 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 LY6G5CQ5SRR4 150 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ATXN7L2Q5T6C5 722 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 STRIP1Q5VSL9 837 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 FAM160B1Q5W0V3 765 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 TMEM200BQ69YZ2 307 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 OTUD7BQ6GQQ9 843 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 MTFR2Q6P444 385 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 KLHL35Q6PF15 583 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLC30A9Q6PML9 568 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SARM1Q6SZW1 724 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 MRGPREQ86SM8 312 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 GPR149Q86SP6 731 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 GLRX5Q86SX6 157 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF366Q8N895 744 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 REPS2Q8NFH8 660 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 LINS1Q8NG48 757 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 GABPB2Q8TAK5 448 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 DENND1AQ8TEH3 1009 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ABHD5Q8WTS1 349 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 NOC3LQ8WTT2 800 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLC25A43Q8WUT9 341 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PRPF31Q8WWY3 499 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 RABGGTAQ92696 567 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 KRT35Q92764 455 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 LPPQ93052 612 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SCAMP4Q969E2 229 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 LENG9Q96B70 501 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLC22A18Q96BI1 424 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 RMDN1Q96DB5 314 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ELP4Q96EB1 424 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 KIF1BPQ96EK5 621 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PERPQ96FX8 193 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZDHHC12Q96GR4 267 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF668Q96K58 619 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PPP1R10Q96QC0 940 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ATP6V0BQ99437 205 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PIP5K1AQ99755 562 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 MESP1Q9BRJ9 268 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms