RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 M0QYV0 167 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 TLR4O00206 839 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 SLC31A1O15431 190 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 RTN2O75298 545 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 RFPL3O75679 317 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 ZNF202O95125 648 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 LTFP02788 710 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 MYL1P05976 194 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PDGFRAP16234 1089 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 ZNF18P17022 549 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 MZF1P28698 734 aaPredicted RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 GTF2H1P32780 548 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PRCPP42785 496 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PMS1P54277 932 aaKnown RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 UBE2HP62256 183 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PPP2CBP62714 309 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PPP2CAP67775 309 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PITX1P78337 314 aaPredicted RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 ZBTB16Q05516 673 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PNOCQ13519 176 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 CDH18Q13634 790 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 ZC3H12AQ5D1E8 599 aaKnown RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 PITRM1Q5JRX3 1037 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 SYPL2Q5VXT5 272 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 RNF219Q5W0B1 726 aaPredicted RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 RAP1GAP2Q684P5 730 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 TMC6Q7Z403 805 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 SPATS2Q86XZ4 545 aaKnown RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 UNC45BQ8IWX7 931 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 ELOA2Q8IYF1 753 aaPredicted RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 AADATQ8N5Z0 425 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.81□□□□□ -1.32
CD44-221ENST00000526000 HJURPQ8NCD3 748 aaPredicted RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 OR2T34Q8NGX1 318 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 SAP25Q8TEE9 199 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 SLC35F5Q8WV83 523 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 GOLGA1Q92805 767 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PTPRN2Q92932 1015 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 TTC17Q96AE7 1141 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 SKA1Q96BD8 255 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 FAM149B1Q96BN6 582 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PRICKLE1Q96MT3 831 aaPredicted RBP6.81□□□□□ -1.32
CD44-221ENST00000526000 OSGEPQ9NPF4 335 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 GDF3Q9NR23 364 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 HPSEQ9Y251 543 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 PLXND1Q9Y4D7 1925 aa6.81□□□□□ -1.32
CD44-221ENST00000526000 TRIM38O00635 465 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 FFAR2O15552 330 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 RRP8O43159 456 aaKnown RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 SIGLEC6O43699 453 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 DFNA5O60443 496 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 BRINP1O60477 761 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 STX10O60499 249 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 C1QL1O75973 258 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 FYNP06241 537 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 SETSIPP0DME0 302 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 GOT1P17174 413 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 TACR2P21452 398 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 GLDCP23378 1020 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 HNF1BP35680 557 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 GGCXP38435 758 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 ACADVLP49748 655 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 NXPH1P58417 271 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 YWHAEP62258 255 aaKnown RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 CXADRP78310 365 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 ECT2LQ008S8 904 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 SFSWAPQ12872 951 aaKnown RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 STAT4Q14765 748 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 CNGA2Q16280 664 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 NFIL3Q16649 462 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 INAVAQ3KP66 663 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 PKDCCQ504Y2 493 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 ZCWPW2Q504Y3 356 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 ZNF542PQ5EBM4 170 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 MS4A13Q5J8X5 152 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 DENND1BQ6P3S1 775 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 LCLAT1Q6UWP7 414 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 USP30Q70CQ3 517 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 SND1Q7KZF4 910 aaKnown RBP eCLIP6.8□□□□□ -1.32
CD44-221ENST00000526000 ZNF605Q86T29 641 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 PRPF39Q86UA1 669 aaKnown RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 CHSY1Q86X52 802 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 ARHGEF19Q8IW93 802 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 PPM1KQ8N3J5 372 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 TTC39CQ8N584 583 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 DQX1Q8TE96 717 aaKnown RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 TMEM174Q8WUU8 243 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 KCTD13Q8WZ19 329 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 FCRL2Q96LA5 508 aaPredicted RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 TIGD1Q96MW7 591 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 FCRL3Q96P31 734 aaPredicted RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 UBL7Q96S82 380 aaPredicted RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 DDX50Q9BQ39 737 aaKnown RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 PRORYQ9H606 182 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 CNGB3Q9NQW8 809 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 DKK4Q9UBT3 224 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 HOOK1Q9UJC3 728 aaKnown RBP6.8□□□□□ -1.32
CD44-221ENST00000526000 STOML2Q9UJZ1 356 aa6.8□□□□□ -1.32
CD44-221ENST00000526000 SARDHQ9UL12 918 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms