RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 SLC9B1Q4ZJI4 515 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 CNTD1Q8N815 330 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 DUS3LQ96G46 650 aaKnown RBP8.19□□□□□ -1.1
BDNF-213ENST00000525950 RBBP8Q99708 897 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 TRIM56Q9BRZ2 755 aaKnown RBP8.19□□□□□ -1.1
BDNF-213ENST00000525950 ILKAPQ9H0C8 392 aaPredicted RBP8.19□□□□□ -1.1
BDNF-213ENST00000525950 SNX15Q9NRS6 342 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 IGSF9Q9P2J2 1179 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 ZNF112Q9UJU3 913 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 RAP2CQ9Y3L5 183 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 SQORQ9Y6N5 450 aa8.19□□□□□ -1.1
BDNF-213ENST00000525950 GOLGA8QA0A0J9YX86 632 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 GOLGA8OA6NCC3 632 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 GOLGA8NF8WBI6 632 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 HDAC3O15379 428 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 KRT19P08727 400 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CHRNA5P30532 468 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 RPL34P49207 117 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 INHBCP55103 352 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 USP46P62068 366 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 TXNL4AP83876 142 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 GBE1Q04446 702 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 MAP1SQ66K74 1059 aaPredicted RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 SCYL2Q6P3W7 929 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 PLPPR4Q7Z2D5 763 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 UBA3Q8TBC4 463 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 HAUS8Q9BT25 410 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 NT5C1AQ9BXI3 368 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 GPATCH2LQ9NWQ4 482 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 UTP6Q9NYH9 597 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 DTLQ9NZJ0 730 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ZNF219Q9P2Y4 722 aaPredicted RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 ZBTB12Q9Y330 459 aaPredicted RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 MGAMO43451 1857 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 LACTBL1A8MY62 500 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 HSPA4LO95757 839 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CYP2C8P10632 490 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ME2P23368 584 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CSE1LP55060 971 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 FLOT2Q14254 428 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CDO1Q16878 200 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 VWA5B1Q5TIE3 1220 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 NCBP2-AS2Q69YL0 99 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 DHRS4L2Q6PKH6 230 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 METTL7BQ6UX53 244 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CATSPERGQ6ZRH7 1159 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 NUP93Q8N1F7 819 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ZNF781Q8N8C0 355 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ZNF280CQ8ND82 737 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 SLC35F5Q8WV83 523 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CERS2Q96G23 380 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 PIWIL1Q96J94 861 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 CSPG4P5Q96PW8 444 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 IL22Q9GZX6 179 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 DRC3Q9H069 523 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 NGRNQ9NPE2 291 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 TXNDC16Q9P2K2 825 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 GNEQ9Y223 722 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 AK5Q9Y6K8 562 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ZBTB42B2RXF5 422 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ACOT8O14734 319 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ITGB3P05106 788 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 NFICP08651 508 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CXCL8P10145 99 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CDK4P11802 303 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
BDNF-213ENST00000525950 ZNF23P17027 643 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 PPARGP37231 505 aaPredicted RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 ALDH3B2P48448 385 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 NDST1P52848 882 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 TUBA4AP68366 448 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 SLC26A9Q7LBE3 791 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 ERI1Q8IV48 349 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 DCLK2Q8N568 766 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 TMEM102Q8N9M5 508 aaPredicted RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 TDRD5Q8NAT2 981 aaKnown RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 KLHL23Q8NBE8 558 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 COLGALT1Q8NBJ5 622 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 GAB3Q8WWW8 586 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 BIRC8Q96P09 236 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 MCMBPQ9BTE3 642 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 PRMT7Q9NVM4 692 aaPredicted RBP8.18□□□□□ -1.1
BDNF-213ENST00000525950 OXSMQ9NWU1 459 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 ANKRD6Q9Y2G4 727 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 PSAT1Q9Y617 370 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 CEPT1Q9Y6K0 416 aa8.18□□□□□ -1.1
BDNF-213ENST00000525950 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.17□□□□□ -1.1
BDNF-213ENST00000525950 ADCY6O43306 1168 aa8.17□□□□□ -1.1
BDNF-213ENST00000525950 HSPA1AP0DMV8 641 aaKnown RBP8.17□□□□□ -1.1
BDNF-213ENST00000525950 HSPA1BP0DMV9 641 aaKnown RBP8.17□□□□□ -1.1
BDNF-213ENST00000525950 MGAT1P26572 445 aa8.17□□□□□ -1.1
BDNF-213ENST00000525950 EMP3P54852 163 aa8.17□□□□□ -1.1
BDNF-213ENST00000525950 MBTD1Q05BQ5 628 aa8.17□□□□□ -1.1
BDNF-213ENST00000525950 DCTN2Q13561 401 aaKnown RBP8.17□□□□□ -1.1
BDNF-213ENST00000525950 EEF1DP3Q658K8 133 aa8.17□□□□□ -1.1
BDNF-213ENST00000525950 STRADAQ7RTN6 431 aa8.17□□□□□ -1.1
BDNF-213ENST00000525950 TMEM135Q86UB9 458 aa8.17□□□□□ -1.1
BDNF-213ENST00000525950 CROCCP3Q8IVE0 287 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms