RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CELF6Q96J87 481 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 XPO6Q96QU8 1125 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 HHIPQ96QV1 700 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 HAPLN3Q96S86 360 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 DDX50Q9BQ39 737 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SPON2Q9BUD6 331 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 CALN1Q9BXU9 219 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 KLC2Q9H0B6 622 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 MUC3BQ9H195 1237 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 TRPV5Q9NQA5 729 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ETNK2Q9NVF9 386 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 FAM86C1Q9NVL1 165 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SPATA6Q9NWH7 488 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 TRMT1Q9NXH9 659 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 CWC15Q9P013 229 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 MARK1Q9P0L2 795 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 DLGAP2Q9P1A6 1054 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 IP6K2Q9UHH9 426 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 GGA2Q9UJY4 613 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 PYCARDQ9ULZ3 195 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 GUCA1BQ9UMX6 200 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 NEU3Q9UQ49 428 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ADGRG1Q9Y653 693 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SPTBN5Q9NRC6 3674 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 COL4A2P08572 1712 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 DOCK8Q8NF50 2099 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 TICRRQ7Z2Z1 1910 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ANAPC1Q9H1A4 1944 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 MYH10P35580 1976 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 A0A0C4DFX4 3053 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 A0A1B0GVM2 712 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TYW5A2RUC4 315 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 LRRD1A4D1F6 860 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 GRID2IPA4D2P6 1211 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TCAF2A6NFQ2 919 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 DRGXA6NNA5 263 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 USP27XA6NNY8 438 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TTC34A8MYJ7 566 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 PRR33A8MZF0 331 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 H0Y858 1186 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 SGK1O00141 431 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CBX4O00257 560 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 DAPK3O43293 454 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 SPOPO43791 374 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 GPR37L1O60883 481 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ADAM23O75077 832 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 PALMO75781 387 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 LATS1O95835 1130 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 MT-CO1P00395 513 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 DESP17661 470 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ERCC2P18074 760 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 POLR2EP19388 210 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 DRD1P21728 446 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 PRKCHP24723 683 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 OR1E1P30953 314 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 GRIA2P42262 883 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ARHGAP25P42331 645 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 IL12RB1P42701 662 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 KIR2DL1P43626 348 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CDH6P55285 790 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TPI1P60174 286 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 DYNLT1P63172 113 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 KRT83P78385 493 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 AMPD2Q01433 879 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CSTF1Q05048 431 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF177Q13360 481 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF211Q13398 564 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CCINQ13939 588 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 PIGHQ14442 188 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 KRT81Q14533 505 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF234Q14588 700 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 POM121L1PQ3SYA9 428 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ACCSLQ4AC99 568 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 FNDC3BQ53EP0 1204 aaKnown RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 MANEALQ5VSG8 457 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 KAZNQ674X7 775 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 MBLAC2Q68D91 279 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 IL31Q6EBC2 164 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 KIAA1211LQ6NV74 962 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 NPNTQ6UXI9 565 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TMEM92Q6UXU6 159 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ARHGAP36Q6ZRI8 547 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 RFX8Q6ZV50 586 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 DAAM2Q86T65 1068 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CCDC117Q8IWD4 279 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 RHOT2Q8IXI1 618 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 CHPFQ8IZ52 775 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 MAML2Q8IZL2 1156 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF513Q8N8E2 541 aaPredicted RBP4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 DTWD2Q8NBA8 298 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 KCTD6Q8NC69 237 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 TPCN2Q8NHX9 752 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 FIBINQ8TAL6 211 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 USP33Q8TEY7 942 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 FNIP1Q8TF40 1166 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 RAPGEF5Q92565 580 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 KRT35Q92764 455 aa4.73□□□□□ -1.65
CHMP4A-202ENST00000524955 AZIN2Q96A70 460 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms