RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 C18orf65Q6ZTR6 163 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 RFX6Q8HWS3 928 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 C11orf44Q8N8P7 122 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 BCAS4Q8TDM0 211 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 TRMT61AQ96FX7 289 aaKnown RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 SUCLG2Q96I99 432 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 ZNF479Q96JC4 524 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 CAPNS2Q96L46 248 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 LRGUKQ96M69 825 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 WDR24Q96S15 920 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 TAOK3Q9H2K8 898 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 PRO3102Q9H379 93 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 FAM83DQ9H4H8 585 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 DDX21Q9NR30 783 aaKnown RBP eCLIP2.02□□□□□ -2.09
CD44-212ENST00000524922 PI4KBQ9UBF8 816 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 AFF4Q9UHB7 1163 aaKnown RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 HACL1Q9UJ83 578 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 MID2Q9UJV3 735 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 NOP58Q9Y2X3 529 aaKnown RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 SIRT4Q9Y6E7 314 aaPredicted RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 SQORQ9Y6N5 450 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 RBBP6Q7Z6E9 1792 aaKnown RBP2.02□□□□□ -2.09
CD44-212ENST00000524922 TIAM2Q8IVF5 1701 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 BDP1A6H8Y1 2624 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 DUOX1Q9NRD9 1551 aa2.02□□□□□ -2.09
CD44-212ENST00000524922 TCF20Q9UGU0 1960 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 MRC1P22897 1456 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 DICER1Q9UPY3 1922 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 SBF1O95248 1867 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 KIF7Q2M1P5 1343 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 CLEC18AA5D8T8 446 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 CYSRT1A8MQ03 144 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 FOXN3O00409 490 aaPredicted RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 PRYO14603 147 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 SPTLC2O15270 562 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 INPPL1O15357 1258 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 PIAS2O75928 621 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 WNT1P04628 370 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 PDGFRBP09619 1106 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 SCP2P22307 547 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 RPS6KB1P23443 525 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 SOX2P48431 317 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 ZNF84P51523 738 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 ITGA8P53708 1063 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 EIF4A1P60842 406 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 WDR5P61964 334 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 RAE1P78406 368 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 GAB1Q13480 694 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 STIM1Q13586 685 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 ACOX1Q15067 660 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 ST3GAL2Q16842 350 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 DENND2CQ68D51 928 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 FBXO46Q6PJ61 603 aaPredicted RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 RBM44Q6ZP01 1051 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 RBM23Q86U06 439 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 PIM3Q86V86 326 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 ADHFE1Q8IWW8 467 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 CLEC18CQ8NCF0 446 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 SUN3Q8TAQ9 357 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 APIPQ96GX9 242 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 FAM227BQ96M60 508 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 HS6ST2Q96MM7 605 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 TMEM45AQ9NWC5 275 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 ZSCAN32Q9NX65 697 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 DDX56Q9NY93 547 aaKnown RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 WWOXQ9NZC7 414 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 ZIM2Q9NZV7 527 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 DNAJB11Q9UBS4 358 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 NKX1-2Q9UD57 310 aaPredicted RBP2.01□□□□□ -2.09
CD44-212ENST00000524922 STEAP1Q9UHE8 339 aa2.01□□□□□ -2.09
CD44-212ENST00000524922 BCORQ6W2J9 1755 aa2□□□□□ -2.09
CD44-212ENST00000524922 ARFGEF2Q9Y6D5 1785 aa2□□□□□ -2.09
CD44-212ENST00000524922 COL5A3P25940 1745 aaPredicted RBP2□□□□□ -2.09
CD44-212ENST00000524922 KTN1Q86UP2 1357 aaKnown RBP2□□□□□ -2.09
CD44-212ENST00000524922 CARMIL3Q8ND23 1372 aa2□□□□□ -2.09
CD44-212ENST00000524922 RAB3GAP2Q9H2M9 1393 aa2□□□□□ -2.09
CD44-212ENST00000524922 CKAP5Q14008 2032 aa2□□□□□ -2.09
CD44-212ENST00000524922 RNF123Q5XPI4 1314 aa2□□□□□ -2.09
CD44-212ENST00000524922 A0A0G2JLW4 131 aa2□□□□□ -2.09
CD44-212ENST00000524922 PRSS44E7EML9 344 aa2□□□□□ -2.09
CD44-212ENST00000524922 F8W8V4 182 aa2□□□□□ -2.09
CD44-212ENST00000524922 RAB27BO00194 218 aa2□□□□□ -2.09
CD44-212ENST00000524922 CTIFO43310 598 aaKnown RBP2□□□□□ -2.09
CD44-212ENST00000524922 RGS10O43665 173 aa2□□□□□ -2.09
CD44-212ENST00000524922 CTNND1O60716 968 aaKnown RBP2□□□□□ -2.09
CD44-212ENST00000524922 NDUFB8O95169 186 aa2□□□□□ -2.09
CD44-212ENST00000524922 HRGP04196 525 aa2□□□□□ -2.09
CD44-212ENST00000524922 TMIGD3P0DMS9 266 aaPredicted RBP2□□□□□ -2.09
CD44-212ENST00000524922 ARP10275 920 aa2□□□□□ -2.09
CD44-212ENST00000524922 MYF5P13349 255 aa2□□□□□ -2.09
CD44-212ENST00000524922 MT3P25713 68 aa2□□□□□ -2.09
CD44-212ENST00000524922 RBL1P28749 1068 aa2□□□□□ -2.09
CD44-212ENST00000524922 TNFRSF8P28908 595 aa2□□□□□ -2.09
CD44-212ENST00000524922 TACR3P29371 465 aa2□□□□□ -2.09
CD44-212ENST00000524922 HOXC9P31274 260 aa2□□□□□ -2.09
CD44-212ENST00000524922 EPHX2P34913 555 aa2□□□□□ -2.09
CD44-212ENST00000524922 RFC4P35249 363 aa2□□□□□ -2.09
CD44-212ENST00000524922 CPA2P48052 419 aa2□□□□□ -2.09
CD44-212ENST00000524922 RHDQ02161 417 aa2□□□□□ -2.09
CD44-212ENST00000524922 STK3Q13188 491 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms