RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	JTB	O76095	146 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	NDST3	O95803	873 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	CSF1R	P07333	972 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	ATP1A3	P13637	1013 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	IL1R1	P14778	569 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	RPS6KB1	P23443	525 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	GABRB3	P28472	473 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	EPHB2	P29323	1055 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC11A2	P49281	568 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC13A2	Q13183	592 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	AMOT	Q4VCS5	1084 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	FAM133B	Q5BKY9	247 aa	Known RBP	5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SULT6B1	Q6IMI4	303 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	UNC13D	Q70J99	1090 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	CHSY1	Q86X52	802 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC15A4	Q8N697	577 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	GLIS1	Q8NBF1	620 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	ZNF518B	Q9C0D4	1074 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	DHX36	Q9H2U1	1008 aa	Known RBP	5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	GLOD4	Q9HC38	313 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SAYSD1	Q9NPB0	183 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SMYD2	Q9NRG4	433 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	CCNL1	Q9UK58	526 aa	Predicted RBP	5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SCAF8	Q9UPN6	1271 aa	Known RBP	5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	PLEKHM1	Q9Y4G2	1056 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	COL5A2	P05997	1499 aa	Predicted RBP	5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	CRYBG1	Q9Y4K1	1723 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	MYOM3	Q5VTT5	1437 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	SPATA31E1	Q6ZUB1	1445 aa		5.23	□□□□□ -1.57
SREK1-213	ENST00000523655	TNFRSF6B	O95407	300 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	PTMS	P20962	102 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	SFPQ	P23246	707 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	KEL	P23276	732 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	CST5	P28325	142 aa	Predicted RBP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	ADD2	P35612	726 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	CARS	P49589	748 aa	Known RBP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	NR1H2	P55055	460 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	SSBP2	P81877	361 aa	Predicted RBP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	MYO1E	Q12965	1108 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	ADCK5	Q3MIX3	580 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC44A4	Q53GD3	710 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	SLC45A4	Q5BKX6	768 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	AARS2	Q5JTZ9	985 aa	Known RBP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	ANKRD16	Q6P6B7	361 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	PNLDC1	Q8NA58	520 aa	Known RBP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	TMEM171	Q8WVE6	324 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	HTRA1	Q92743	480 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	RILPL2	Q969X0	211 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	RSRC1	Q96IZ7	334 aa	Known RBP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	BARD1	Q99728	777 aa	Known RBP	5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	CHCHD6	Q9BRQ6	235 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	CHST8	Q9H2A9	424 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	RGL1	Q9NZL6	768 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	FEM1B	Q9UK73	627 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	ADAMTS5	Q9UNA0	930 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	CLTCL1	P53675	1640 aa		5.22	□□□□□ -1.57
SREK1-213	ENST00000523655	AKAP12	Q02952	1782 aa		5.21	□□□□□ -1.57
SREK1-213	ENST00000523655	NHS	Q6T4R5	1651 aa		5.21	□□□□□ -1.57
SREK1-213	ENST00000523655	COL6A3	P12111	3177 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	CPD	O75976	1380 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	ANKRD30A	Q9BXX3	1397 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655		A0A087X0M5	115 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655		A0A1B0GX30	115 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	MBD3L3	A6NE82	208 aa	Predicted RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	PIP5K1B	O14986	540 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	KCNQ3	O43525	872 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	KCNA3	P22001	575 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	FPR3	P25089	353 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	CTGF	P29279	349 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	PPIF	P30405	207 aa	Known RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	MAP2K2	P36507	400 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	RAD52	P43351	418 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	POLE2	P56282	527 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	VAMP2	P63027	116 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	TUBA4A	P68366	448 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	TRPC3	Q13507	836 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	RAB32	Q13637	225 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	E2F2	Q14209	437 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	TEDDM1	Q5T9Z0	273 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	ANKRD45	Q5TZF3	282 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	CCDC30	Q5VVM6	783 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	RRAGB	Q5VZM2	374 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	ARL6IP4	Q66PJ3	421 aa	Known RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	FCRL6	Q6DN72	434 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	SFRP4	Q6FHJ7	346 aa	Predicted RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	ITPRIPL1	Q6GPH6	555 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	C2CD5	Q86YS7	1000 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	TSPYL6	Q8N831	410 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	RAPGEF4	Q8WZA2	1011 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	TBC1D5	Q92609	795 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	RUBCN	Q92622	972 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	LRRC46	Q96FV0	321 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	LENG8	Q96PV6	779 aa	Predicted RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	TREX2	Q9BQ50	279 aa	Predicted RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	DDX23	Q9BUQ8	820 aa	Known RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	MAGEB5	Q9BZ81	275 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	PDGFC	Q9NRA1	345 aa		5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	HERC5	Q9UII4	1024 aa	Known RBP	5.21	□□□□□ -1.58
SREK1-213	ENST00000523655	NOL7	Q9UMY1	257 aa	Known RBP	5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms