RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 ISL2Q96A47 359 aa18.32■□□□□ 0.52
IKBKB-228ENST00000523517 PGLYRP2Q96PD5 576 aa18.32■□□□□ 0.52
IKBKB-228ENST00000523517 HNRNPABQ99729 332 aaKnown RBP18.32■□□□□ 0.52
IKBKB-228ENST00000523517 LRRC40Q9H9A6 602 aa18.32■□□□□ 0.52
IKBKB-228ENST00000523517 ASB3Q9Y575 518 aa18.32■□□□□ 0.52
IKBKB-228ENST00000523517 RRN3P2A6NIE6 340 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 KCNK1O00180 336 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 DCLK1O15075 740 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 CCNT2O60583 730 aaKnown RBP18.31■□□□□ 0.52
IKBKB-228ENST00000523517 TAF6P49848 677 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 CDK7P50613 346 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 DSG1Q02413 1049 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 NME3Q13232 169 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 VWA5B1Q5TIE3 1220 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 PDPK2PQ6A1A2 396 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 OR6Y1Q8NGX8 325 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 RBBP8Q99708 897 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 ECSITQ9BQ95 431 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 SGIP1Q9BQI5 828 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 S100A14Q9HCY8 104 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 KLHL8Q9P2G9 620 aaPredicted RBP18.31■□□□□ 0.52
IKBKB-228ENST00000523517 STAP1Q9ULZ2 295 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 HUS1O60921 280 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 CAPN15O75808 1086 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 USP1O94782 785 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 DARSP14868 501 aaKnown RBP18.31■□□□□ 0.52
IKBKB-228ENST00000523517 CRABP2P29373 138 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 NDUFV1P49821 464 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 SERPINB8P50452 374 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 CCNA1P78396 465 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 CDC42EP1Q00587 391 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 DEUP1Q05D60 604 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 DGKDQ16760 1214 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 SYPL2Q5VXT5 272 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 NAIF1Q69YI7 327 aaPredicted RBP18.31■□□□□ 0.52
IKBKB-228ENST00000523517 PAXIP1Q6ZW49 1069 aaPredicted RBP18.31■□□□□ 0.52
IKBKB-228ENST00000523517 OSTM1Q86WC4 334 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 ZNF669Q96BR6 464 aaPredicted RBP18.31■□□□□ 0.52
IKBKB-228ENST00000523517 GOLGA2P5Q9HBQ8 144 aa18.31■□□□□ 0.52
IKBKB-228ENST00000523517 KAT6AQ92794 2004 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 ENO4A6NNW6 628 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 CLDN5O00501 218 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 BEST1O76090 585 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 SPRP35270 261 aaPredicted RBP18.3■□□□□ 0.52
IKBKB-228ENST00000523517 SV2CQ496J9 727 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 STRA8Q7Z7C7 330 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 ADGRG6Q86SQ4 1221 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.3■□□□□ 0.52
IKBKB-228ENST00000523517 OR6J1Q8NGC5 347 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 WNT8BQ93098 351 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 CMTM5Q96DZ9 223 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 AGAP3Q96P47 875 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 SLC2A13Q96QE2 648 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 NR1H4Q96RI1 486 aaPredicted RBP18.3■□□□□ 0.52
IKBKB-228ENST00000523517 GORASP1Q9BQQ3 440 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 PIGVQ9NUD9 493 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 PCDHB12Q9Y5F1 795 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 MAP3K13O43283 966 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 AP2A1O95782 977 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 KCNE1P15382 129 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 PTPN3P26045 913 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 GJA5P36382 358 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 GTF2A2P52657 109 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 LIMK2P53671 638 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 SOX4Q06945 474 aaPredicted RBP18.3■□□□□ 0.52
IKBKB-228ENST00000523517 DUSP28Q4G0W2 176 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 PGM2L1Q6PCE3 622 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 ZNF467Q7Z7K2 595 aaPredicted RBP18.3■□□□□ 0.52
IKBKB-228ENST00000523517 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 PLD6Q8N2A8 252 aaKnown RBP18.3■□□□□ 0.52
IKBKB-228ENST00000523517 IFT43Q96FT9 208 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 ATXN7L3BQ96GX2 97 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 PPP1R12CQ9BZL4 782 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 LRRC4Q9HBW1 653 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 VANGL2Q9ULK5 521 aa18.3■□□□□ 0.52
IKBKB-228ENST00000523517 CITO14578 2027 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 XPOTO43592 962 aaKnown RBP18.29■□□□□ 0.52
IKBKB-228ENST00000523517 BUD23O43709 281 aaKnown RBP18.29■□□□□ 0.52
IKBKB-228ENST00000523517 USP12O75317 370 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 NPR3P17342 541 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 NCF2P19878 526 aaPredicted RBP18.29■□□□□ 0.52
IKBKB-228ENST00000523517 WARSP23381 471 aaKnown RBP18.29■□□□□ 0.52
IKBKB-228ENST00000523517 PCBP1Q15365 356 aaKnown RBP eCLIP18.29■□□□□ 0.52
IKBKB-228ENST00000523517 FSTL4Q6MZW2 842 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 TMEM135Q86UB9 458 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 ACTRT2Q8TDY3 377 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 KCTD13Q8WZ19 329 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 AZIN2Q96A70 460 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 AGAP2Q99490 1192 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 BFARQ9NZS9 450 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 CDY2AQ9Y6F7 541 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 CDY1Q9Y6F8 540 aa18.29■□□□□ 0.52
IKBKB-228ENST00000523517 FAM72CH0Y354 149 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 SMIM24O75264 130 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 ERCC2P18074 760 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 ADRA1BP35368 520 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 EPHB1P54762 984 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 BTKQ06187 659 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms