RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, human

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIRMA-208	ENST00000523263	TRIM69	Q86WT6	500 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	SLC25A45	Q8N413	288 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	AADAT	Q8N5Z0	425 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	HJURP	Q8NCD3	748 aa	Predicted RBP	9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	KIAA0895	Q8NCT3	520 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	OR14C36	Q8NHC7	312 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	KCNE4	Q8WWG9	221 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	PTPRN2	Q92932	1015 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	CCDC97	Q96F63	343 aa	Predicted RBP	9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	DEPDC7	Q96QD5	511 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	SEMA4C	Q9C0C4	833 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	BLZF1	Q9H2G9	400 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	LRRC4	Q9HBW1	653 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	TMEM8A	Q9HCN3	771 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	CNGB3	Q9NQW8	809 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	CISH	Q9NSE2	258 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	SFMBT1	Q9UHJ3	866 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	CYTH4	Q9UIA0	394 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	ERVW-1	Q9UQF0	538 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	KALRN	O60229	2985 aa		9.8	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3D	A0A087WVF3	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3I	A0A087WXS9	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3E	A0A087X179	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3K	A0A087X1G2	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TYW5	A2RUC4	315 aa	Known RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3F	A6NER0	549 aa	Predicted RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	YJEFN3	A6XGL0	299 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3L	B9A6J9	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263		E7ENQ6	273 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263		K7ENP7	123 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	CALU	O43852	315 aa	Predicted RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	MOCS3	O95396	460 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3H	P0C7X1	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	PDIA4	P13667	645 aa	Known RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	CASP1	P29466	404 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	SLC6A4	P31645	630 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	DRD3	P35462	400 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	GCLM	P48507	274 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	CSRP3	P50461	194 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	DAOA	P59103	153 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	PPP3CA	Q08209	521 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	BST2	Q10589	180 aa	Known RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	NNT	Q13423	1086 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	ELAVL3	Q14576	367 aa	Known RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	STAT4	Q14765	748 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	KMT5B	Q4FZB7	885 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	ZNF394	Q53GI3	561 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	HS1BP3	Q53T59	392 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	PITRM1	Q5JRX3	1037 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	KRT39	Q6A163	491 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3G	Q6DHY5	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3C	Q6IPX1	549 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	RFWD3	Q6PCD5	774 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	INO80C	Q6PI98	192 aa	Predicted RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	KDM7A	Q6ZMT4	941 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TBC1D3	Q8IZP1	549 aa	Predicted RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	IRGQ	Q8WZA9	623 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	IFT43	Q96FT9	208 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	INTS4	Q96HW7	963 aa	Known RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	ZNF396	Q96N95	335 aa	Predicted RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	IPO9	Q96P70	1041 aa	Known RBP	9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	CPNE5	Q9HCH3	593 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	ASCL3	Q9NQ33	180 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	THSD1	Q9NS62	852 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	KLHL11	Q9NVR0	708 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TJP2	Q9UDY2	1190 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	KIAA1257	Q9ULG3	409 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	PCDHB1	Q9Y5F3	818 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	CFAP46	Q8IYW2	2715 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	MAST4	O15021	2626 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	NUMA1	Q14980	2115 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	TMEM131	Q92545	1883 aa		9.79	□□□□□ -0.84
VIRMA-208	ENST00000523263	GOLGA6L7	A0A1B0GV03	622 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	TTC34	A8MYJ7	566 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	PRAMEF26	H0Y7S4	382 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	TULP2	O00295	520 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	PLRG1	O43660	514 aa	Known RBP	9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	MPO	P05164	745 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	MYL1	P05976	194 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	GIMD1	P0DJR0	217 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	SETSIP	P0DME0	302 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	KRT13	P13646	458 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	DGKA	P23743	735 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	MZF1	P28698	734 aa	Predicted RBP	9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	MLLT3	P42568	568 aa	Predicted RBP	9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	DUSP3	P51452	185 aa	Predicted RBP	9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	PPP2CB	P62714	309 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	PPP2CA	P67775	309 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	GABRE	P78334	506 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	DAB2	P98082	770 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	ECT2L	Q008S8	904 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	SULT2A1	Q06520	285 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	SLC12A1	Q13621	1099 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	LY6D	Q14210	128 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	CEP135	Q66GS9	1140 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	NEK5	Q6P3R8	708 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	CCDC117	Q8IWD4	279 aa	Predicted RBP	9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	STK40	Q8N2I9	435 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	TMEM145	Q8NBT3	493 aa		9.78	□□□□□ -0.84
VIRMA-208	ENST00000523263	FBXL13	Q8NEE6	735 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms