RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
PABPC1-221ENST00000522720 PARD6AQ9NPB6 346 aa16.9■□□□□ 0.3
PABPC1-221ENST00000522720 TAS2R14Q9NYV8 317 aa16.9■□□□□ 0.3
PABPC1-221ENST00000522720 NUP205Q92621 2012 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 DRGXA6NNA5 263 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 ZNF217O75362 1048 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 CLDN11O75508 207 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 EPN2O95208 641 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 EPHX1P07099 455 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 HLA-EP13747 358 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 IRAK1P51617 712 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 PLK1P53350 603 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 KLHL30Q0D2K2 578 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 ZNF177Q13360 481 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 CAMK2GQ13555 558 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 C15orf59Q2T9L4 293 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 PLEKHG6Q3KR16 790 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 SH3PXD2AQ5TCZ1 1133 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 PMS2CLQ68D20 193 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 CXorf57Q6NSI4 855 aaKnown RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 DNAJC24Q6P3W2 148 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 STRADAQ7RTN6 431 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 METTL3Q86U44 580 aaKnown RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 FAM131BQ86XD5 332 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 TMPRSS6Q8IU80 811 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 APCDD1Q8J025 514 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 FRMD1Q8N878 549 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 KDM1BQ8NB78 822 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 SYN2Q92777 582 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 PPP1R9BQ96SB3 815 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 MKRN2Q9H000 416 aaKnown RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 SLC6A17Q9H1V8 727 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 PRDM16Q9HAZ2 1276 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 TMPRSS4Q9NRS4 437 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 MBD1Q9UIS9 605 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 PCDHGA5Q9Y5G8 931 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 SNX10Q9Y5X0 201 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 DOCK4Q8N1I0 1966 aa16.89■□□□□ 0.29
PABPC1-221ENST00000522720 MUC22E2RYF6 1773 aaPredicted RBP16.89■□□□□ 0.29
PABPC1-221ENST00000522720 MAP3K13O43283 966 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 C7P10643 843 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 GZMAP12544 262 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 SKILP12757 684 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 GPD1P21695 349 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 RRM1P23921 792 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 ADRA1BP35368 520 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 COPAP53621 1224 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 CDH4P55283 916 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 ZBED6P86452 979 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 CDO1Q16878 200 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 RAB6CQ53S08 254 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 SPDYCQ5MJ68 293 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 PPP1R15BQ5SWA1 713 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 KIAA1324Q6UXG2 1013 aaKnown RBP16.88■□□□□ 0.29
PABPC1-221ENST00000522720 LRRC31Q6UY01 552 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 MYO19Q96H55 970 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 MRGPRX3Q96LB0 322 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 XPO4Q9C0E2 1151 aaKnown RBP16.88■□□□□ 0.29
PABPC1-221ENST00000522720 RAB6CQ9H0N0 254 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 ARRDC1-AS1Q9H2J1 176 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 SEMA4GQ9NTN9 838 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 SUN2Q9UH99 717 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 CAPN11Q9UMQ6 739 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 ERVW-1Q9UQF0 538 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 TBC1D30Q9Y2I9 924 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 CEP192Q8TEP8 1941 aa16.88■□□□□ 0.29
PABPC1-221ENST00000522720 IGLV3-10A0A075B6K4 115 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 TMCO5BA8MYB1 307 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 DDX3XO00571 662 aaKnown RBP eCLIP16.87■□□□□ 0.294e-56■■□□□ 12.8
PABPC1-221ENST00000522720 CNTN5O94779 1100 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 TPM3P06753 285 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 SRPRAP08240 638 aaKnown RBP16.87■□□□□ 0.29
PABPC1-221ENST00000522720 MZF1P28698 734 aaPredicted RBP16.87■□□□□ 0.29
PABPC1-221ENST00000522720 CTSOP43234 321 aaPredicted RBP16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ZNF143P52747 638 aaPredicted RBP16.87■□□□□ 0.29
PABPC1-221ENST00000522720 HDAC4P56524 1084 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ST8SIA6P61647 398 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 RPL7AP62424 266 aaKnown RBP16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ECT2LQ008S8 904 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ARID5BQ14865 1188 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 CSRP2Q16527 193 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ARL13BQ3SXY8 428 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 PLA2G2CQ5R387 149 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ARTNQ5T4W7 220 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 SLC36A4Q6YBV0 504 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 LPCAT2Q7L5N7 544 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ZNF366Q8N895 744 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 OR2T3Q8NH03 318 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 FAM172AQ8WUF8 416 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 CPLX3Q8WVH0 158 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ALG14Q96F25 216 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 SIPA1Q96FS4 1042 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 FBRSQ9HAH7 460 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 ITM2CQ9NQX7 267 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 USP18Q9UMW8 372 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 OR51B4Q9Y5P0 310 aa16.87■□□□□ 0.29
PABPC1-221ENST00000522720 BZW2Q9Y6E2 419 aaKnown RBP16.87■□□□□ 0.29
PABPC1-221ENST00000522720 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms