RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 DUSP15Q9H1R2 295 aaPredicted RBP18.42■□□□□ 0.54
CLK4-211ENST00000522556 NCDNQ9UBB6 729 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 ITIH6Q6UXX5 1313 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 RALGAPA1Q6GYQ0 2036 aa18.42■□□□□ 0.54
CLK4-211ENST00000522556 CEP192Q8TEP8 1941 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 GVINP1Q7Z2Y8 2422 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 A0A1B0GVM2 712 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 TCAF2A6NFQ2 919 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 FAM72CH0Y354 149 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 ALDH1A2O94788 518 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 EPHX1P07099 455 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 TGM1P22735 817 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 P2RY2P41231 377 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 STK19P49842 368 aaPredicted RBP18.41■□□□□ 0.54
CLK4-211ENST00000522556 COPAP53621 1224 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 ZBED6P86452 979 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 ZNF252P-AS1Q0IIN9 211 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 PLEKHG6Q3KR16 790 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 C5orf22Q49AR2 442 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 RABGAP1LQ5R372 815 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 FAM72AQ5TYM5 149 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 LAIR1Q6GTX8 287 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 SDE2Q6IQ49 451 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 FAM72DQ6L9T8 149 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 SND1Q7KZF4 910 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLK4-211ENST00000522556 TFAP2DQ7Z6R9 452 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 FAM72BQ86X60 149 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 CENPIQ92674 756 aaPredicted RBP18.41■□□□□ 0.54
CLK4-211ENST00000522556 ALG14Q96F25 216 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 NEU3Q9UQ49 428 aa18.41■□□□□ 0.54
CLK4-211ENST00000522556 CFAP54Q96N23 3096 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 E9PAM4 449 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 F9P00740 461 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 FTLP02792 175 aaPredicted RBP18.4■□□□□ 0.54
CLK4-211ENST00000522556 DLDP09622 509 aaKnown RBP18.4■□□□□ 0.54
CLK4-211ENST00000522556 POLR2EP19388 210 aaKnown RBP18.4■□□□□ 0.54
CLK4-211ENST00000522556 MAMLD1Q13495 774 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 KIAA1324Q6UXG2 1013 aaKnown RBP18.4■□□□□ 0.54
CLK4-211ENST00000522556 KIAA2013Q8IYS2 634 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 TTC17Q96AE7 1141 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 RPL10LQ96L21 214 aaKnown RBP18.4■□□□□ 0.54
CLK4-211ENST00000522556 SMOC1Q9H4F8 434 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 KIAA1522Q9P206 1035 aaPredicted RBP18.4■□□□□ 0.54
CLK4-211ENST00000522556 ARHGAP20Q9P2F6 1191 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 ZNF212Q9UDV6 495 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 RAB23Q9ULC3 237 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 NUP205Q92621 2012 aa18.4■□□□□ 0.54
CLK4-211ENST00000522556 IGLV3-10A0A075B6K4 115 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 TIMM44O43615 452 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 SRGAP2O75044 1071 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 SPEM2Q0P670 501 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 USP39Q53GS9 565 aaKnown RBP18.39■□□□□ 0.53
CLK4-211ENST00000522556 TTC39BQ5VTQ0 682 aaPredicted RBP18.39■□□□□ 0.53
CLK4-211ENST00000522556 PLEKHA7Q6IQ23 1121 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 STRADAQ7RTN6 431 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 GAS2L3Q86XJ1 694 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 PYROXD2Q8N2H3 581 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 DEFB119Q8N690 84 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 ZNF653Q96CK0 615 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 RBSNQ9H1K0 784 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 ADAMTS1Q9UHI8 967 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 SLCO3A1Q9UIG8 710 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 CYP8B1Q9UNU6 501 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 ERVW-1Q9UQF0 538 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 LUC7L2Q9Y383 392 aaKnown RBP18.39■□□□□ 0.53
CLK4-211ENST00000522556 OR51B4Q9Y5P0 310 aa18.39■□□□□ 0.53
CLK4-211ENST00000522556 WDR87Q6ZQQ6 2873 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 PTPRZ1P23471 2315 aaPredicted RBP18.38■□□□□ 0.53
CLK4-211ENST00000522556 A0A087X0T9 212 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 DRGXA6NNA5 263 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 TTC34A8MYJ7 566 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 SERPING1P05155 500 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 FAM228BP0C875 321 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 VAV1P15498 845 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 ADRA1BP35368 520 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 ZNF143P52747 638 aaPredicted RBP18.38■□□□□ 0.53
CLK4-211ENST00000522556 CAMK2GQ13555 558 aaPredicted RBP18.38■□□□□ 0.53
CLK4-211ENST00000522556 STARD3Q14849 445 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 MANEALQ5VSG8 457 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 DAB2IPQ5VWQ8 1189 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 PMS2CLQ68D20 193 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 ARMCX6Q7L4S7 300 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 VSTM4Q8IW00 320 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 ARFGAP1Q8N6T3 406 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 SYN2Q92777 582 aaPredicted RBP18.38■□□□□ 0.53
CLK4-211ENST00000522556 ZC3H10Q96K80 434 aaKnown RBP18.38■□□□□ 0.53
CLK4-211ENST00000522556 HAPLN3Q96S86 360 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 PSMB7Q99436 277 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 ARRDC1-AS1Q9H2J1 176 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 PRSS16Q9NQE7 514 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 MYO1AQ9UBC5 1043 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 CNOT8Q9UFF9 292 aaKnown RBP18.38■□□□□ 0.53
CLK4-211ENST00000522556 GMEB2Q9UKD1 530 aa18.38■□□□□ 0.53
CLK4-211ENST00000522556 NUMA1Q14980 2115 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 IGHV1OR15-9A0A0B4J2B8 117 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 A0A0D9SEW6 157 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 SYNCRIPO60506 623 aaKnown RBP18.37■□□□□ 0.53
CLK4-211ENST00000522556 SNAP91O60641 907 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 RTN2O75298 545 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms