RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PPP1R36Q96LQ0 422 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 TMEM245Q9H330 911 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 ATAD3AQ9NVI7 634 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 SOX13Q9UN79 622 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 IGKV6D-41A0A0C4DH26 115 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 E2F8A0AVK6 867 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 B4GALT5O43286 388 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 TLL1O43897 1013 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 SUPT7LO94864 414 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 POLR2EP19388 210 aaKnown RBP16.52■□□□□ 0.24
USP42-207ENST00000521713 TNFRSF8P28908 595 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 DCTN2Q13561 401 aaKnown RBP16.52■□□□□ 0.24
USP42-207ENST00000521713 FAM71AQ8IYT1 594 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 GLIS3Q8NEA6 775 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 SHC3Q92529 594 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 SPG21Q9NZD8 308 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 RPL26L1Q9UNX3 145 aaKnown RBP16.52■□□□□ 0.24
USP42-207ENST00000521713 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 CYP2A6P11509 494 aaPredicted RBP16.52■□□□□ 0.23
USP42-207ENST00000521713 LAG3P18627 525 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 ELF3P78545 371 aaPredicted RBP16.52■□□□□ 0.23
USP42-207ENST00000521713 PPIDQ08752 370 aaKnown RBP16.52■□□□□ 0.23
USP42-207ENST00000521713 MFSD7Q6UXD7 560 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 TAGAPQ8N103 731 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 TNFRSF25Q93038 417 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 BTBD10Q9BSF8 475 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 LOC100653049A0A140TA62 436 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 APOC4-APOC2K7ER74 178 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 ABLIM1O14639 778 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 LIN7AO14910 233 aaPredicted RBP16.52■□□□□ 0.23
USP42-207ENST00000521713 KRT34O76011 436 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 APOC2P02655 101 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 GRK2P25098 689 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 TNFSF9P41273 254 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 BCL2L1Q07817 233 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 IL17AQ16552 155 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 SGO1Q5FBB7 561 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 STRA8Q7Z7C7 330 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 NUP93Q8N1F7 819 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 FBXO25Q8TCJ0 367 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 SUSD6Q92537 303 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 POLE3Q9NRF9 147 aa16.52■□□□□ 0.23
USP42-207ENST00000521713 FAM32AQ9Y421 112 aaKnown RBP16.52■□□□□ 0.23
USP42-207ENST00000521713 GNRH1P01148 92 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 GRK3P35626 688 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 KCNK10P57789 538 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 LPCAT2Q7L5N7 544 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 PHACTR4Q8IZ21 702 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 MPP4Q96JB8 637 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 SYNDIG1LA6NDD5 238 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 AP5Z1O43299 807 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 SOX6P35712 828 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 CSTF3Q12996 717 aaKnown RBP16.51■□□□□ 0.23
USP42-207ENST00000521713 RASA2Q15283 850 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 KCNA10Q16322 511 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 LRRC38Q5VT99 294 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 A0A0B4J269 797 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 MOXD2PA6NHM9 499 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 IFRD1O00458 451 aaPredicted RBP16.51■□□□□ 0.23
USP42-207ENST00000521713 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 LRRC74BQ6ZQY2 392 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 KATNAL2Q8IYT4 538 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 KAT5Q92993 513 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 MFSD14AQ96MC6 490 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 SH3GL1Q99961 368 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 C1QTNF7Q9BXJ2 289 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 UBP1Q9NZI7 540 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 COPG2Q9UBF2 871 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 SPASTQ9UBP0 616 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 STK39Q9UEW8 545 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 ATRNL1Q5VV63 1379 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
USP42-207ENST00000521713 TPP2P29144 1249 aaPredicted RBP16.51■□□□□ 0.23
USP42-207ENST00000521713 ZFP1Q6P2D0 407 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 RSPH1Q8WYR4 309 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 UPF1Q92900 1129 aaKnown RBP eCLIP16.51■□□□□ 0.23
USP42-207ENST00000521713 FAM111AQ96PZ2 611 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 GANQ9H2C0 597 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 CDC42EP4Q9H3Q1 356 aaKnown RBP16.51■□□□□ 0.23
USP42-207ENST00000521713 RNF19AQ9NV58 838 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 FBXL21Q9UKT6 434 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 ITM2BQ9Y287 266 aa16.51■□□□□ 0.23
USP42-207ENST00000521713 EVPLLA8MZ36 301 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 ATP6V1E1P36543 226 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 TBX2Q13207 712 aaPredicted RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 CEP78Q5JTW2 689 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 MTDHQ86UE4 582 aaKnown RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 MYLPFQ96A32 169 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 DYRK1BQ9Y463 629 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 ZNF7P17097 686 aaPredicted RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 MAPK8P45983 427 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 ZNF143P52747 638 aaPredicted RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 ADARP55265 1226 aaKnown RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 PLEKHA7Q6IQ23 1121 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 SPPL2BQ8TCT7 592 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 ZNF184Q99676 751 aaPredicted RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 MRPS26Q9BYN8 205 aaKnown RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 POLR1EQ9GZS1 481 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms