RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 FAM124BQ9H5Z6 455 aaPredicted RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 USP29Q9HBJ7 922 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 CHST12Q9NRB3 414 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 ARHGEF38Q9NXL2 777 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 SLC27A5Q9Y2P5 690 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 AAR2Q9Y312 384 aaKnown RBP10.4□□□□□ -0.74
MCF2-209ENST00000520602 PTCH2Q9Y6C5 1203 aa10.4□□□□□ -0.74
MCF2-209ENST00000520602 A0A096LPK6 155 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 TCRBV5S1A1TA0A578 114 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 NT5C1B-RDH14C9J2C7 533 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 GCATO75600 419 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 LRIG2O94898 1065 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 KRT16P08779 473 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 CSH1P0DML2 217 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 CSH2P0DML3 217 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 IRF1P10914 325 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 SLC10A2Q12908 348 aaPredicted RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 KCNJ11Q14654 390 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 RNF43Q68DV7 783 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 KLC3Q6P597 504 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 GTF2IRD1Q9UHL9 959 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 TSR3Q9UJK0 312 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 KIAA1217Q5T5P2 1943 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 PHGDHO43175 533 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 UNC5CO95185 931 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 TSHRP16473 764 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 CDH17Q12864 832 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 CRYMQ14894 314 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 OTOP3Q7RTS5 596 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 TNS4Q8IZW8 715 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 DCAKDQ8WVC6 231 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 FCRL2Q96LA5 508 aaPredicted RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 CRTAC1Q9NQ79 661 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 MYO18AQ92614 2054 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 DOCK5Q9H7D0 1870 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 PSMD3O43242 534 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 ALDH2P05091 517 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 CNTFP26441 200 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 KPNA2P52292 529 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 TBX4P57082 545 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 UGP2Q16851 508 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 SPRED3Q2MJR0 410 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 PPM1JQ5JR12 505 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 SLC9A4Q6AI14 798 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 ATAD1Q8NBU5 361 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 DQX1Q8TE96 717 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 GIPC2Q8TF65 315 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 ARHGAP39Q9C0H5 1083 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 AGO3Q9H9G7 860 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 TRHDEQ9UKU6 1024 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 GNEQ9Y223 722 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 RUVBL2Q9Y230 463 aaKnown RBP10.39□□□□□ -0.75
MCF2-209ENST00000520602 TEX264Q9Y6I9 313 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 GOLGA8QA0A0J9YX86 632 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 GOLGA8OA6NCC3 632 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 GOLGA8NF8WBI6 632 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 SEPT4O43236 478 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 CCNB1P14635 433 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 SERPINB8P50452 374 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 CUL3Q13618 768 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 ARHGEF6Q15052 776 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 PACS1Q6VY07 963 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 TAC4Q86UU9 113 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 RELL1Q8IUW5 271 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 BANPQ8N9N5 519 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 BLOC1S5Q8TDH9 187 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 ABCC13Q9NSE7 274 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 MIOSQ9NXC5 875 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 GABRQQ9UN88 632 aa10.39□□□□□ -0.75
MCF2-209ENST00000520602 PTGESO14684 152 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 ITGA2BP08514 1039 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 GEMP55040 296 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 SP3Q02447 781 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 DEFB128Q7Z7B8 93 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 MFSD3Q96ES6 412 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 OXNAD1Q96HP4 312 aaPredicted RBP10.38□□□□□ -0.75
MCF2-209ENST00000520602 SMOQ99835 787 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 CAB39LQ9H9S4 337 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 SARS2Q9NP81 518 aaKnown RBP10.38□□□□□ -0.75
MCF2-209ENST00000520602 ACSS2Q9NR19 701 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 UNCXA6NJT0 531 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 GOLGA8CPA6NN73 597 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 AP3B1O00203 1094 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 SCAMP3O14828 347 aaKnown RBP10.38□□□□□ -0.75
MCF2-209ENST00000520602 TIMM44O43615 452 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 PAGE1O75459 146 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 TPSB2P20231 275 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 CCND1P24385 295 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 SLC1A6P48664 564 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 PAPOLAP51003 745 aaKnown RBP10.38□□□□□ -0.75
MCF2-209ENST00000520602 MAXP61244 160 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 GRIK3Q13003 919 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 TPSAB1Q15661 275 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 LACTB2Q53H82 288 aaPredicted RBP10.38□□□□□ -0.75
MCF2-209ENST00000520602 TP53INP2Q8IXH6 220 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 POU5F2Q8N7G0 328 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 SPATA22Q8NHS9 363 aa10.38□□□□□ -0.75
MCF2-209ENST00000520602 SCG3Q8WXD2 468 aaKnown RBP10.38□□□□□ -0.75
MCF2-209ENST00000520602 AZIN2Q96A70 460 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms