RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 SMPD4Q9NXE4 827 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 TAS2R10Q9NYW0 307 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 TBC1D14Q9P2M4 693 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 KLQ9UEF7 1012 aa8.08□□□□□ -1.12
LSM1-202ENST00000520286 CNOT11Q9UKZ1 510 aaKnown RBP8.08□□□□□ -1.12
LSM1-202ENST00000520286 WRNQ14191 1432 aaPredicted RBP eCLIP8.07□□□□□ -1.12
LSM1-202ENST00000520286 PDE8BO95263 885 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 SCGB1D1O95968 90 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 EBLN1P0CF75 366 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 UBL4AP11441 157 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 HOXA5P20719 270 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 PRPH2P23942 346 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 AVPR2P30518 371 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 EEFSECP57772 596 aaKnown RBP8.07□□□□□ -1.12
LSM1-202ENST00000520286 BLOC1S1P78537 153 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 CFHR3Q02985 330 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 PTP4A2Q12974 167 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 MPP3Q13368 585 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 RNASE12Q5GAN4 147 aaKnown RBP8.07□□□□□ -1.12
LSM1-202ENST00000520286 SNX30Q5VWJ9 437 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 RNF207Q6ZRF8 634 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 CCDC129Q6ZRS4 1044 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 ENDOVQ8N8Q3 282 aaKnown RBP8.07□□□□□ -1.12
LSM1-202ENST00000520286 CACTINQ8WUQ7 758 aaKnown RBP8.07□□□□□ -1.12
LSM1-202ENST00000520286 CUL5Q93034 780 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 THAP7Q9BT49 309 aaPredicted RBP8.07□□□□□ -1.12
LSM1-202ENST00000520286 HDHD5Q9BXW7 423 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 RNF26Q9BY78 433 aaPredicted RBP8.07□□□□□ -1.12
LSM1-202ENST00000520286 SEMA4BQ9NPR2 832 aaPredicted RBP8.07□□□□□ -1.12
LSM1-202ENST00000520286 SLC22A11Q9NSA0 550 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 ZDHHC7Q9NXF8 308 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 NSMCE4AQ9NXX6 385 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 B3GNT3Q9Y2A9 372 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 ABCA5Q8WWZ7 1642 aa8.07□□□□□ -1.12
LSM1-202ENST00000520286 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 GOLGA6L10A0A0M3HER8 536 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 GAGE10A6NGK3 116 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 TTC34A8MYJ7 566 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 TCERG1O14776 1098 aaKnown RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 ZNF500O60304 480 aaPredicted RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 TTLL1O95922 423 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 CLEC3BP05452 202 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 ARSAP15289 507 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 STAT6P42226 847 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 HARS2P49590 506 aaKnown RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 COPB1P53618 953 aaKnown RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 SLC37A1P57057 533 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 WDR5P61964 334 aaKnown RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 ARHGAP8P85298 464 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 GAB1Q13480 694 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 EIF4A2Q14240 407 aaKnown RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 CNGA3Q16281 694 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 ZNF766Q5HY98 468 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 LY6G5CQ5SRR4 150 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 PEG10Q86TG7 708 aaKnown RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 SLC44A3Q8N4M1 653 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 ADPRHL1Q8NDY3 354 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 METTL6Q8TCB7 284 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 DVL3Q92997 716 aaPredicted RBP8.06□□□□□ -1.12
LSM1-202ENST00000520286 KIF1BPQ96EK5 621 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 MMS19Q96T76 1030 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 EYA3Q99504 573 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 MPHOSPH8Q99549 860 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 MLST8Q9BVC4 326 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 ADGRE3Q9BY15 652 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 TRIM31Q9BZY9 425 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 GHITMQ9H3K2 345 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 SLC2A4RGQ9NR83 387 aa8.06□□□□□ -1.12
LSM1-202ENST00000520286 SYN3O14994 580 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 FYB1O15117 783 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 PTP4A3O75365 173 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 CYP4B1P13584 511 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 NDUFS1P28331 727 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 HNF1BP35680 557 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 RPS6KA3P51812 740 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 B4GALNT1Q00973 533 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 CCNG2Q16589 344 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 ERCC6LQ2NKX8 1250 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 PCID2Q5JVF3 399 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 SH2D4BQ5SQS7 431 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 LAIR1Q6GTX8 287 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 MRGPREQ86SM8 312 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 SCN4BQ8IWT1 228 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 LCORLQ8N3X6 602 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 TNIP2Q8NFZ5 429 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 KAZALD1Q96I82 304 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 SFXN1Q9H9B4 322 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 HAUS2Q9NVX0 235 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 HCN3Q9P1Z3 774 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 SLC25A13Q9UJS0 675 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 PIAS3Q9Y6X2 628 aa8.05□□□□□ -1.12
LSM1-202ENST00000520286 MAST3O60307 1309 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 ALDOCP09972 364 aaKnown RBP8.04□□□□□ -1.12
LSM1-202ENST00000520286 ACADMP11310 421 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 APEHP13798 732 aaKnown RBP8.04□□□□□ -1.12
LSM1-202ENST00000520286 PSMA4P25789 261 aaKnown RBP8.04□□□□□ -1.12
LSM1-202ENST00000520286 RGS2P41220 211 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 GRIA3P42263 894 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 RAD52P43351 418 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 SHC2P98077 582 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms