RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 IL9RQ01113 521 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 CYP4F3Q08477 520 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 CDH18Q13634 790 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 MS4A13Q5J8X5 152 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 PITRM1Q5JRX3 1037 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 C9orf64Q5T6V5 341 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 NCEH1Q6PIU2 408 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 CCDC117Q8IWD4 279 aaPredicted RBP14.16□□□□□ -0.14
VDAC3-204ENST00000519072 DHX40Q8IX18 779 aaKnown RBP14.16□□□□□ -0.14
VDAC3-204ENST00000519072 PPM1KQ8N3J5 372 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 CARNMT1Q8N4J0 409 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
VDAC3-204ENST00000519072 OR2T34Q8NGX1 318 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 SPATA20Q8TB22 786 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 HNRNPLLQ8WVV9 542 aaKnown RBP14.16□□□□□ -0.14
VDAC3-204ENST00000519072 KAT5Q92993 513 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 SKA1Q96BD8 255 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 SLC39A13Q96H72 371 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 SLC6A18Q96N87 628 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 ELF4Q99607 663 aaPredicted RBP14.16□□□□□ -0.14
VDAC3-204ENST00000519072 NUCKS1Q9H1E3 243 aaKnown RBP14.16□□□□□ -0.14
VDAC3-204ENST00000519072 GDPD2Q9HCC8 539 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 ERVW-1Q9UQF0 538 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 TLR6Q9Y2C9 796 aa14.16□□□□□ -0.14
VDAC3-204ENST00000519072 MYLKQ15746 1914 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 HELZ2Q9BYK8 2649 aaKnown RBP14.15□□□□□ -0.14
VDAC3-204ENST00000519072 DOCK9Q9BZ29 2069 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 EDDM13A0A1B0GTR0 161 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 A0A1W2PP55 124 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 FAM149AA5PLN7 773 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 SART1O43290 800 aaKnown RBP14.15□□□□□ -0.14
VDAC3-204ENST00000519072 LUC7L3O95232 432 aaKnown RBP14.15□□□□□ -0.14
VDAC3-204ENST00000519072 SMC2O95347 1197 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 MOCS3O95396 460 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 DCAF6Q58WW2 860 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 FSCBQ5H9T9 825 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 DHRS13Q6UX07 377 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 MMS22LQ6ZRQ5 1243 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 BEND5Q7L4P6 421 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 MMAAQ8IVH4 418 aaKnown RBP14.15□□□□□ -0.14
VDAC3-204ENST00000519072 SCUBE3Q8IX30 993 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 LMO3Q8TAP4 145 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 CEP63Q96MT8 703 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 OMDQ99983 421 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 MIS12Q9H081 205 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 NEUROG2Q9H2A3 272 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 EBF2Q9HAK2 575 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 PCDHGA1Q9Y5H4 931 aa14.15□□□□□ -0.14
VDAC3-204ENST00000519072 A0A087WV48 116 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 TTC34A8MYJ7 566 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 P4HA2O15460 535 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 RNASEH2AO75792 299 aaKnown RBP14.14□□□□□ -0.15
VDAC3-204ENST00000519072 CALCAP01258 141 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 WNT1P04628 370 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 CD38P28907 300 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 SLC8A1P32418 973 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 CTSOP43234 321 aaPredicted RBP14.14□□□□□ -0.15
VDAC3-204ENST00000519072 GPD2P43304 727 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 CCR5P51681 352 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 ECT2LQ008S8 904 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 GCNT1Q02742 428 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 CETN1Q12798 172 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 KCNJ12Q14500 433 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 CCDC157Q569K6 752 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 SND1Q7KZF4 910 aaKnown RBP eCLIP14.14□□□□□ -0.15
VDAC3-204ENST00000519072 TAC4Q86UU9 113 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 TMPRSS12Q86WS5 348 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 CFAP52Q8N1V2 620 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 SMARCE1Q969G3 411 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 FAM149B1Q96BN6 582 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 FAM129BQ96TA1 746 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 SLCO3A1Q9UIG8 710 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 TPX2Q9ULW0 747 aaKnown RBP14.14□□□□□ -0.15
VDAC3-204ENST00000519072 NAALADL1Q9UQQ1 740 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 KALRNO60229 2985 aa14.14□□□□□ -0.15
VDAC3-204ENST00000519072 PTPRQQ9UMZ3 2332 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 SHROOM3Q8TF72 1996 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 A0A1W2PR77 199 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 ENC1O14682 589 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 PSMA7O14818 248 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 YKT6O15498 198 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 MOCS2O96007 188 aaPredicted RBP14.13□□□□□ -0.15
VDAC3-204ENST00000519072 ADH1BP00325 375 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 CDK4P11802 303 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 GOT1P17174 413 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 ABCB4P21439 1286 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 STIM1Q13586 685 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 SHBQ15464 509 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 CCDC40Q4G0X9 1142 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 PRAMEF14Q5SWL7 426 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 RRAGAQ7L523 313 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 GATAD2AQ86YP4 633 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 LGI2Q8N0V4 545 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 AADATQ8N5Z0 425 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 ADAM32Q8TC27 787 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 SAP25Q8TEE9 199 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 ERCC4Q92889 916 aaPredicted RBP14.13□□□□□ -0.15
VDAC3-204ENST00000519072 PTPRN2Q92932 1015 aa14.13□□□□□ -0.15
VDAC3-204ENST00000519072 DHTKD1Q96HY7 919 aaPredicted RBP14.13□□□□□ -0.15
VDAC3-204ENST00000519072 LRIG1Q96JA1 1093 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms