RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 TUBA1BP68363 451 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 NEDD8Q15843 81 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 LRIT3Q3SXY7 679 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 MROH9Q5TGP6 573 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ZBTB49Q6ZSB9 765 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 CHSY3Q70JA7 882 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TUBA1AQ71U36 451 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TAS2R42Q7RTR8 314 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 UNC45BQ8IWX7 931 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 KIAA2013Q8IYS2 634 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 CSF3RQ99062 836 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TUBA1CQ9BQE3 449 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 COG4Q9H9E3 785 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 MOSPD1Q9UJG1 213 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ZBTB1Q9Y2K1 713 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 TANC1Q9C0D5 1861 aa13.86□□□□□ -0.19
PABPC1-208ENST00000519004 ERVV-1B6SEH8 477 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 TBX3O15119 743 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 SEC24DO94855 1032 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 IL18RAPO95256 599 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 HARS2P49590 506 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 NLRP11P59045 1033 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 MAPRE1Q15691 268 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 LIN9Q5TKA1 542 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 PLEKHG7Q6ZR37 379 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 AKAP14Q86UN6 197 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 CCDC60Q8IWA6 550 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 MAPK15Q8TD08 544 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 CRYGNQ8WXF5 182 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 ZUFSPQ96AP4 578 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 TXNDC15Q96J42 360 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 OR52B2Q96RD2 323 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 NOL11Q9H8H0 719 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 GPN2Q9H9Y4 310 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 PSME2Q9UL46 239 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 UNCXA6NJT0 531 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 C9IYK1 514 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 CPNE6O95741 557 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 SNHG28P0DPA3 235 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 YBX3P16989 372 aaKnown RBP eCLIP13.85□□□□□ -0.193e-36■□□□□ 10.8
PABPC1-208ENST00000519004 NRLP54845 237 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 ABCE1P61221 599 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 DYNLT1P63172 113 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 SLC10A5Q5PT55 438 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 STXBP5Q5T5C0 1151 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 N4BP2L1Q5TBK1 243 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 DCP2Q8IU60 420 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 HERC6Q8IVU3 1022 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 C10orf107Q8IVU9 208 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 LRRC47Q8N1G4 583 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 RP9Q8TA86 221 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 GABPB2Q8TAK5 448 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 ZC3H15Q8WU90 426 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 RSAD2Q8WXG1 361 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 CNDP1Q96KN2 507 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 NT5C1BQ96P26 610 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 P2RX7Q99572 595 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 MTG1Q9BT17 334 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 WDR12Q9GZL7 423 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 MUC3BQ9H195 1237 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 MRPL47Q9HD33 250 aaKnown RBP13.85□□□□□ -0.19
PABPC1-208ENST00000519004 GPRC5CQ9NQ84 441 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 PI4KBQ9UBF8 816 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 JAG2Q9Y219 1238 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 PCDHGA8Q9Y5G5 932 aa13.85□□□□□ -0.19
PABPC1-208ENST00000519004 M0QX08 132 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 GABBR2O75899 941 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 VAPBO95292 243 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ADRB2P07550 413 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 CFHP08603 1231 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ETFBP38117 255 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ZNF252P-AS1Q0IIN9 211 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 TRIM71Q2Q1W2 868 aaKnown RBP13.84□□□□□ -0.19
PABPC1-208ENST00000519004 GADL1Q6ZQY3 521 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 TPH2Q8IWU9 490 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ANKFN1Q8N957 763 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 MFSD2AQ8NA29 543 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 RAD21L1Q9H4I0 556 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ATP13A3Q9H7F0 1226 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 HMG20AQ9NP66 347 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 CNOT6Q9ULM6 557 aaKnown RBP13.84□□□□□ -0.19
PABPC1-208ENST00000519004 TRIM38O00635 465 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 SLC22A1O15245 554 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 PLIN3O60664 434 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 ALX3O95076 343 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 UGT2B4P06133 528 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 POLR2IP36954 125 aaKnown RBP13.84□□□□□ -0.19
PABPC1-208ENST00000519004 PTPN9P43378 593 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 KRT6CP48668 564 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 RAD23AP54725 363 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 NME5P56597 212 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 RPL7AP62424 266 aaKnown RBP13.84□□□□□ -0.19
PABPC1-208ENST00000519004 YWHAZP63104 245 aaKnown RBP13.84□□□□□ -0.19
PABPC1-208ENST00000519004 RHDQ02161 417 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 PRKCQQ04759 706 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 DPYSL3Q14195 570 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 TMTC4Q5T4D3 741 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 FAXCQ5TGI0 409 aa13.84□□□□□ -0.19
PABPC1-208ENST00000519004 LRRC38Q5VT99 294 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms