RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 MPHOSPH6Q99547 160 aaKnown RBP16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 FAM96AQ9H5X1 160 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 CAB39LQ9H9S4 337 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 G3V2L1 256 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 IRF6O14896 467 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 SBF1O95248 1867 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 POLBP06746 335 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 VCLP18206 1134 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 MTTPP55157 894 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 KLF10Q13118 480 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 OTUD1Q5VV17 481 aaPredicted RBP16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 FBXL19Q6PCT2 694 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 KBTBD6Q86V97 674 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 ANKRD52Q8NB46 1076 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 OR52K1Q8NGK4 314 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 OR52B2Q96RD2 323 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 GORASP1Q9BQQ3 440 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 CDH19Q9H159 772 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 PRDM12Q9H4Q4 367 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 ACSS2Q9NR19 701 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 SNTG2Q9NY99 539 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 HES2Q9Y543 173 aa16.96■□□□□ 0.31
PCDHGA11-202ENST00000518882 SHROOM3Q8TF72 1996 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 SYNJ2BP-COX16A0A087WUM0 186 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 A0A1B0GVG6 124 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 GRM5P41594 1212 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 GLUD2P49448 558 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 SNX16P57768 344 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 ARHGAP1Q07960 439 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 CCDC153Q494R4 210 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 STRADAQ7RTN6 431 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 RBBP8Q99708 897 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 CPNE1Q99829 537 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 NAT9Q9BTE0 207 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 CCDC28BQ9BUN5 200 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 ZCWPW1Q9H0M4 648 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 COX16Q9P0S2 106 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 KCNK1O00180 336 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 PIM1P11309 404 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 RPL34P49207 117 aaKnown RBP16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 SULT1E1P49888 294 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 BCAT1P54687 386 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 BIRC2Q13490 618 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 TTLL4Q14679 1199 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 GRTP1Q5TC63 336 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 FSTL4Q6MZW2 842 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 STRA8Q7Z7C7 330 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 ST13P4Q8IZP2 240 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 DEFB106AQ8N104 65 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 RNF139Q8WU17 664 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 KBTBD7Q8WVZ9 684 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 ISL2Q96A47 359 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 AGAP3Q96P47 875 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 LENG8Q96PV6 779 aaPredicted RBP16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 CPSF2Q9P2I0 782 aaKnown RBP16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 RBPJLQ9UBG7 517 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 ARHGAP26Q9UNA1 814 aa16.95■□□□□ 0.3
PCDHGA11-202ENST00000518882 NUP205Q92621 2012 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 CREB3O43889 395 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 HSPA4LO95757 839 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 LTFP02788 710 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 ETS2P15036 469 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 MATKP42679 507 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 GRM2Q14416 872 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 KCTD2Q14681 263 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 SPANXN3Q5MJ09 141 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 NCSTNQ92542 709 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 ZNF669Q96BR6 464 aaPredicted RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 CDY2AQ9Y6F7 541 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 CDY1Q9Y6F8 540 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 GOLGA8QA0A0J9YX86 632 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 GOLGA8OA6NCC3 632 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 ANKRD33BA6NCL7 494 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 GOLGA8NF8WBI6 632 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 CASQ2O14958 399 aaPredicted RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 STK10O94804 968 aaKnown RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 RTN3O95197 1032 aaPredicted RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 SLC25A27O95847 323 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 GARSP41250 739 aaKnown RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 LIMK2P53671 638 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 ZBTB6Q15916 424 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 MMEL1Q495T6 779 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 UNC93AQ86WB7 457 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 NME8Q8N427 588 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 SLC2A14Q8TDB8 520 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 CENPKQ9BS16 269 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 EIF2AQ9BY44 585 aaKnown RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 VCX3BQ9H321 246 aa16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 MAGED2Q9UNF1 606 aaPredicted RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 PDCD11Q14690 1871 aaKnown RBP16.94■□□□□ 0.3
PCDHGA11-202ENST00000518882 TSC2P49815 1807 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 CHRNGP07510 517 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 GLDCP23378 1020 aa16.93■□□□□ 0.3
PCDHGA11-202ENST00000518882 TKTP29401 623 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms