RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 TAF4BQ92750 862 aa10.24□□□□□ -0.77
SH2D4A-202ENST00000518040 JAKMIP2Q96AA8 810 aa10.24□□□□□ -0.77
SH2D4A-202ENST00000518040 CYFIP2Q96F07 1278 aa10.24□□□□□ -0.77
SH2D4A-202ENST00000518040 FAM49BQ9NUQ9 324 aa10.24□□□□□ -0.77
SH2D4A-202ENST00000518040 NLGN3Q9NZ94 848 aa10.24□□□□□ -0.77
SH2D4A-202ENST00000518040 UBE4BO95155 1302 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 PRAMEF26H0Y7S4 382 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 SIN3BO75182 1162 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 PPFIA2O75334 1257 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 RPN1P04843 607 aaKnown RBP10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 KRT10P13645 584 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 CR2P20023 1033 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 DGKAP23743 735 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 AFMP43652 599 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 CLN3Q13286 438 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 NCOA4Q13772 614 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 LINC00303Q3SY05 128 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 C4orf17Q53FE4 359 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 ADGRF1Q5T601 910 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 SCARA5Q6ZMJ2 495 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 CCDC73Q6ZRK6 1079 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 TMC6Q7Z403 805 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 MMAAQ8IVH4 418 aaKnown RBP10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 C12orf29Q8N999 325 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 WNT2BQ93097 391 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 TTC17Q96AE7 1141 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 SGF29Q96ES7 293 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 KLHDC7BQ96G42 594 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 EPSTI1Q96J88 318 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 EPAS1Q99814 870 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 FGFBP2Q9BYJ0 223 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 LRRC27Q9C0I9 530 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 KLHL11Q9NVR0 708 aa10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 CGNQ9P2M7 1197 aaKnown RBP10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 HBS1LQ9Y450 684 aaKnown RBP10.23□□□□□ -0.77
SH2D4A-202ENST00000518040 MYO9AB2RTY4 2548 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 EDDM13A0A1B0GTR0 161 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 SLC7A4O43246 635 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 TCEA3O75764 348 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 SRPRAP08240 638 aaKnown RBP10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 ITGB6P18564 788 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 TLE1Q04724 770 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 SETMARQ53H47 684 aaPredicted RBP10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 WDR36Q8NI36 951 aaKnown RBP10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 WDR48Q8TAF3 677 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 IFT43Q96FT9 208 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 MYO19Q96H55 970 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 APOLD1Q96LR9 279 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 SRRTQ9BXP5 876 aaKnown RBP10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 DUSP16Q9BY84 665 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 SDCBP2Q9H190 292 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 AGPAT3Q9NRZ7 376 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 IRAK2O43187 625 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 ITGA2BP08514 1039 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 MYF5P13349 255 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 YWHAGP61981 247 aaKnown RBP eCLIP10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 EHHADHQ08426 723 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 C9orf64Q5T6V5 341 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 TRIM69Q86WT6 500 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 CCDC117Q8IWD4 279 aaPredicted RBP10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 ZC3H3Q8IXZ2 948 aaKnown RBP10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 ZNF507Q8TCN5 953 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 NT5C1AQ9BXI3 368 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 UBXN6Q9BZV1 441 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 ARHGAP20Q9P2F6 1191 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 CYTH4Q9UIA0 394 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 RABGEF1Q9UJ41 708 aa10.22□□□□□ -0.77
SH2D4A-202ENST00000518040 TYW5A2RUC4 315 aaKnown RBP10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 FFAR2O15552 330 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 KIF20AO95235 890 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 MOCS3O95396 460 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 THEGLP0DJG4 465 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 PSMD8P48556 350 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 CYP2J2P51589 502 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 SLC8A3P57103 927 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 CLDN10P78369 228 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 INCA1Q0VD86 236 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 KCNMA1Q12791 1236 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 RBM44Q6ZP01 1051 aaKnown RBP10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 BRAPQ7Z569 592 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 C12orf56Q8IXR9 622 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 AADATQ8N5Z0 425 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 ZSCAN1Q8NBB4 408 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 FIBINQ8TAL6 211 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 FAM174AQ8TBP5 190 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 IFI44Q8TCB0 444 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 ATXN7L3BQ96GX2 97 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 PRR11Q96HE9 360 aaPredicted RBP10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 OSBPL2Q9H1P3 480 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 ENTPD2Q9Y5L3 495 aa10.21□□□□□ -0.78
SH2D4A-202ENST00000518040 ITIH6Q6UXX5 1313 aa10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 CLEC18AA5D8T8 446 aa10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 SCAMP1O15126 338 aa10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 TGFB1I1O43294 461 aa10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 PLRG1O43660 514 aaKnown RBP10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 PIAS2O75928 621 aa10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 TNFSF15O95150 251 aa10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 C4BPAP04003 597 aaKnown RBP10.2□□□□□ -0.78
SH2D4A-202ENST00000518040 CD70P32970 193 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms