RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 DDX1Q92499 740 aaKnown RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 SLC7A6OSQ96CW6 309 aaPredicted RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 UTP6Q9NYH9 597 aaKnown RBP11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
PCDHGA1-202ENST00000517417 F5H5T6 163 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 CLPTM1O96005 669 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 ASS1P00966 412 aaKnown RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 CCDC130P13994 396 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SLC18A1P54219 525 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 GDF10P55107 478 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 ABCE1P61221 599 aaKnown RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 MPP3Q13368 585 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 C1orf220Q5T0J3 134 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 MRNIPQ6NTE8 343 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SIAH1Q8IUQ4 282 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 YAF2Q8IY57 180 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 GALNT15Q8N3T1 639 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 CRYGNQ8WXF5 182 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 FICDQ9BVA6 458 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 COL5A3P25940 1745 aaPredicted RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 TGDSO95455 350 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 CCNE2O96020 404 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 TSHRP16473 764 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 GNAZP19086 355 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 NME5P56597 212 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 POU4F1Q01851 419 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 DDX39BQ13838 428 aaKnown RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 KCNT2Q6UVM3 1135 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 PTAR1Q7Z6K3 402 aaPredicted RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 WDR60Q8WVS4 1066 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SLC44A1Q8WWI5 657 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 TUBGCP3Q96CW5 907 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 DMAP1Q9NPF5 467 aaPredicted RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 GPRC5DQ9NZD1 345 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 CBX4O00257 560 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 HNRNPCP07910 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 RALBP11234 206 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 RBL1P28749 1068 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SCNN1BP51168 640 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 IYDQ6PHW0 289 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 APBB2Q92870 758 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 UTP4Q969X6 686 aaKnown RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 RRAGCQ9HB90 399 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 STARD7Q9NQZ5 370 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 PKD2L2Q9NZM6 624 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 COL20A1Q9P218 1284 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 DCDC2Q9UHG0 476 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SRP72O76094 671 aaKnown RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 NFICP08651 508 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 GPX6P59796 221 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 GAD2Q05329 585 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 MFSD10Q14728 455 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 AGAP9Q5VTM2 703 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 DRICH1Q6PGQ1 229 aaPredicted RBP11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 ILDR2Q71H61 639 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 JOSD2Q8TAC2 188 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SMPD4Q9NXE4 827 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 ACOT9Q9Y305 439 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SNCAIPQ9Y6H5 919 aa11.07□□□□□ -0.64
PCDHGA1-202ENST00000517417 SIGLEC16A6NMB1 481 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 TIMM44O43615 452 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 MAGEC1O60732 1142 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 TM7SF2O76062 418 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 C4BPAP04003 597 aaKnown RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 WEE1P30291 646 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PPP3CCP48454 512 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CAPSQ13938 189 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CYLC2Q14093 348 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CSHL1Q14406 222 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CXCL17Q6UXB2 119 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 POLNQ7Z5Q5 900 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 BRD8Q9H0E9 1235 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 VTA1Q9NP79 307 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 APPL1Q9UKG1 709 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CHADO15335 359 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 B4GALT5O43286 388 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PEX10O60683 326 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 FBXO21O94952 628 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 FKBP9O95302 570 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 HMGCRP04035 888 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 MBL2P11226 248 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 TFE3P19532 575 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 KLF1Q13351 362 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PTK2BQ14289 1009 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 FKBP9P1Q75LS8 142 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 RELL1Q8IUW5 271 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 CLEC4FQ8N1N0 589 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 PCSK9Q8NBP7 692 aaKnown RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRPM4Q8TD43 1214 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 FOPNLQ96NB1 174 aa11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 APOBEC3GQ9HC16 384 aaKnown RBP11.06□□□□□ -0.64
PCDHGA1-202ENST00000517417 VANGL2Q9ULK5 521 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms