RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TANGO6Q9C0B7 1094 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 BTBD1Q9H0C5 482 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 NTN4Q9HB63 628 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 SLC52A3Q9NQ40 469 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 THG1LQ9NWX6 298 aaKnown RBP-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 KCNG1Q9UIX4 513 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 PHTF1Q9UMS5 762 aa-0.55□□□□□ -2.5
RNU6-539P-201ENST00000516665 SORL1Q92673 2214 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 IGHV4-28A0A0C4DH34 117 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF891A8MT65 544 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 FAM171A2A8MVW0 826 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 CAPN9O14815 690 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 NPC1O15118 1278 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZFAND5O76080 213 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 GNLYP22749 145 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 C21orf33P30042 268 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 LSP1P33241 339 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 IGFALSP35858 605 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 PEX5P50542 639 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 JAK3P52333 1124 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 BRWD1-AS2P59051 145 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 WDR5P61964 334 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZFP36L1Q07352 338 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 GRAPQ13588 217 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 RAB39AQ14964 217 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 SYT16Q17RD7 645 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 MPEG1Q2M385 716 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 FAM160B1Q5W0V3 765 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF790Q6PG37 636 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 PASD1Q8IV76 773 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 NXPE1Q8N323 547 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 C11orf42Q8N5U0 333 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 PCSK9Q8NBP7 692 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 BRIX1Q8TDN6 353 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 CLMNQ96JQ2 1002 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 MGME1Q9BQP7 344 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 RPP25Q9BUL9 199 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 TRIM6Q9C030 488 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 CHST8Q9H2A9 424 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 USP29Q9HBJ7 922 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 METTL5Q9NRN9 209 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 RLIMQ9NVW2 624 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 GTSE1Q9NYZ3 720 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZKSCAN7Q9P0L1 754 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF624Q9P2J8 865 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 IPO11Q9UI26 975 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZBTB21Q9ULJ3 1066 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 DRG1Q9Y295 367 aaKnown RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 INPP5FQ9Y2H2 1132 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 DAAM1Q9Y4D1 1078 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 LOXL2Q9Y4K0 774 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 RAI2Q9Y5P3 530 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 HEMK1Q9Y5R4 338 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 PTCH1Q13635 1447 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 MEGF8Q7Z7M0 2845 aa-0.56□□□□□ -2.5
RNU6-539P-201ENST00000516665 A0A0G2JLM5 398 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 A0A0U1RQJ8 604 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 DPPA5A6NC42 116 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 FOXO6A8MYZ6 492 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 TNFRSF6BO95407 300 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF853P0CG23 659 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 PAX1P15863 534 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 HDCP19113 662 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 DSG1Q02413 1049 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 TLE1Q04724 770 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 RAPSNQ13702 412 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 DHX34Q14147 1143 aaKnown RBP-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 FAM189A2Q15884 450 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 NFE2L2Q16236 605 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 FSCN1Q16658 493 aaKnown RBP-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 C15orf32Q32M92 178 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 EFHC1Q5JVL4 640 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 CACHD1Q5VU97 1274 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 LIPMQ5VYY2 423 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 TBC1D9BQ66K14 1250 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 TBC1D1Q86TI0 1168 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF280BQ86YH2 543 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 RNF152Q8N8N0 203 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 KDM1BQ8NB78 822 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 LNX1Q8TBB1 728 aaPredicted RBP-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 AUTS2Q8WXX7 1259 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 KAT2BQ92831 832 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 RAX2Q96IS3 184 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 TTLL2Q9BWV7 592 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 SIK2Q9H0K1 926 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 IL36RNQ9UBH0 155 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 CTSZQ9UBR2 303 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 PFDN2Q9UHV9 154 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 MOB4Q9Y3A3 225 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 PYGO1Q9Y3Y4 419 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 NID2Q14112 1375 aa-0.57□□□□□ -2.5
RNU6-539P-201ENST00000516665 ZNF469Q96JG9 3925 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 FLG2Q5D862 2391 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 A0A1W2PPR1 153 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 SMIM1B2RUZ4 78 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 CD99P14209 185 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 NAGAP17050 411 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 ATF4P18848 351 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 ENPP1P22413 925 aa-0.58□□□□□ -2.5
RNU6-539P-201ENST00000516665 ACVR2AP27037 513 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms