RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ALFQ53S48 1182 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 CCDC50Q8IVM0 306 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 RTL3Q8N8U3 475 aaKnown RBP21.6■■□□□ 1.05
LSM6-207ENST00000515311 RNF157Q96PX1 679 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 SLC2A11Q9BYW1 496 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 DUSP12Q9UNI6 340 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 EFR3BQ9Y2G0 817 aa21.6■■□□□ 1.05
LSM6-207ENST00000515311 LUC7L3O95232 432 aaKnown RBP21.59■■□□□ 1.05
LSM6-207ENST00000515311 MAPKAPK2P49137 400 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 GAB4Q2WGN9 574 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 TJAP1Q5JTD0 557 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 CIR1Q86X95 450 aaPredicted RBP21.59■■□□□ 1.05
LSM6-207ENST00000515311 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.59■■□□□ 1.05
LSM6-207ENST00000515311 PCDH19Q8TAB3 1148 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 BHMTQ93088 406 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 PLK2Q9NYY3 685 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 SNX12Q9UMY4 172 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 TBC1D30Q9Y2I9 924 aa21.59■■□□□ 1.05
LSM6-207ENST00000515311 CHD5Q8TDI0 1954 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 hCG_1818297A0A087WSY0 165 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.58■■□□□ 1.05
LSM6-207ENST00000515311 DCLK1O15075 740 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 FANCGO15287 622 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 ERCC2P18074 760 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 GJA4P35212 333 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 ZNF177Q13360 481 aaPredicted RBP21.58■■□□□ 1.05
LSM6-207ENST00000515311 TFDP2Q14188 446 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 PAPD7Q5XG87 772 aaKnown RBP21.58■■□□□ 1.05
LSM6-207ENST00000515311 ANKS1BQ7Z6G8 1248 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 TFAP2DQ7Z6R9 452 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 SETD3Q86TU7 594 aaPredicted RBP21.58■■□□□ 1.05
LSM6-207ENST00000515311 RNF135Q8IUD6 432 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 MFN1Q8IWA4 741 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 CCDC117Q8IWD4 279 aaPredicted RBP21.58■■□□□ 1.05
LSM6-207ENST00000515311 ETFBKMTQ8IXQ9 262 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 FIBINQ8TAL6 211 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 XPO6Q96QU8 1125 aaKnown RBP21.58■■□□□ 1.05
LSM6-207ENST00000515311 MAK16Q9BXY0 300 aaKnown RBP21.58■■□□□ 1.05
LSM6-207ENST00000515311 DNAI1Q9UI46 699 aa21.58■■□□□ 1.05
LSM6-207ENST00000515311 MIA3Q5JRA6 1907 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 CES2O00748 559 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 NARSO43776 548 aaKnown RBP21.57■■□□□ 1.04
LSM6-207ENST00000515311 GLULP15104 373 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 PRLRP16471 622 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 AMPD1P23109 780 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 OR1E1P30953 314 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 EIF2DP41214 584 aaKnown RBP21.57■■□□□ 1.04
LSM6-207ENST00000515311 OXCT1P55809 520 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 AMPD2Q01433 879 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 ZNF211Q13398 564 aaPredicted RBP21.57■■□□□ 1.04
LSM6-207ENST00000515311 CDH18Q13634 790 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 C6orf118Q5T5N4 469 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 SLC9A4Q6AI14 798 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 TMCO3Q6UWJ1 677 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 SYT10Q6XYQ8 523 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 GJD3Q8N144 294 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 UMODL1-AS1Q8N2C9 162 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 PQLC3Q8N755 202 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 MSANTD3Q96H12 275 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 PBKQ96KB5 322 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 OSBPL8Q9BZF1 889 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 FBXO10Q9UK96 956 aa21.57■■□□□ 1.04
LSM6-207ENST00000515311 H0Y626 953 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 ZFXP17010 805 aaPredicted RBP21.56■■□□□ 1.04
LSM6-207ENST00000515311 TCP1P17987 556 aaKnown RBP21.56■■□□□ 1.04
LSM6-207ENST00000515311 CASQ1P31415 396 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 SEL1L2Q5TEA6 688 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 CXorf57Q6NSI4 855 aaKnown RBP21.56■■□□□ 1.04
LSM6-207ENST00000515311 ZNF783Q6ZMS7 281 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 CARNMT1Q8N4J0 409 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 LZTR1Q8N653 840 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.56■■□□□ 1.04
LSM6-207ENST00000515311 OSBPL9Q96SU4 736 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 PSMB7Q99436 277 aa21.56■■□□□ 1.04
LSM6-207ENST00000515311 C8orf33Q9H7E9 229 aaPredicted RBP21.56■■□□□ 1.04
LSM6-207ENST00000515311 ESPNB1AK53 854 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.55■■□□□ 1.04
LSM6-207ENST00000515311 APOL1O14791 398 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 TULP3O75386 442 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 KRT10P13645 584 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 CXCR5P32302 372 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 SERPINB6P35237 376 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 NDST2P52849 883 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 PAFAH1B3Q15102 231 aaKnown RBP21.55■■□□□ 1.04
LSM6-207ENST00000515311 NCBP2-AS2Q69YL0 99 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 BBS12Q6ZW61 710 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 RALGPS2Q86X27 583 aaPredicted RBP21.55■■□□□ 1.04
LSM6-207ENST00000515311 RFX6Q8HWS3 928 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 UBALD2Q8IYN6 164 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 TTC8Q8TAM2 541 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 CHFRQ96EP1 664 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 KLC2Q9H0B6 622 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 ETNK2Q9NVF9 386 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 DNAJC17Q9NVM6 304 aaKnown RBP21.55■■□□□ 1.04
LSM6-207ENST00000515311 SLC27A6Q9Y2P4 619 aa21.55■■□□□ 1.04
LSM6-207ENST00000515311 ILVBLA1L0T0 632 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 SPECC1L-ADORA2AF8WAN1 911 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 ZNF500O60304 480 aaPredicted RBP21.54■■□□□ 1.04
LSM6-207ENST00000515311 TJP3O95049 919 aa21.54■■□□□ 1.04
LSM6-207ENST00000515311 CTHP32929 405 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms